Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01868 ATGGCTAATGTTATTGCTACCGCAACTggttcttcttcctcttcattcTCTTCTGCTGTATTCTATCCAAAAAAGCATAACCAAGAGAAAATCCAAAAGTGGAAAGGAGCTCTTATGGAAGCAGCCAATTTATCTGGGTGGCACTCTAAGAATTATAGGACGGAATATGAACTTGTTGAGAACattgtcaaaaatattatgcAAAAATTGAATCGTATGTACTCAAATGATTTGAAAAATCTTGTTGGAATTGAGCACAACTATGCATGTGTTGAATCAATGCTGAAAATTGGGTCAAGAAATGTTAGAATCATCGGAATTTGGGGCATGGGCGGCTTAGGAAAAACAACTCTTGCTGCTGTTGCATTTGCCAAGCTCTCTTCTCGCTACGAGGCTAGTTGTTTCTTGGCAAATGTAAGGGAGGAAGCAACCAATCATGGACTGAATTATTTGCGCAATAAACTTCTATCTGAGCTACTTGACGATAAAGATGTCTATATTAATGATATAGAAATGCATGACTTAATACAGGAAATGGGTAAGGAAATTGTTCGTCAAGAGTCTAGTAAAAGTCCTGGAAGACGCAGCAGGCTATGGAATCCTGAAGAAATATATGACATATTTAAAAGCAACAAGGTGACTGATACAGTGGAAGGCATAATCTTGAACTTGTCTCAAATTAAATCGGATATACATTTAAGCCATGACACCTTAACTAAGATGAGTAACTTAAGACTTGTGAAATTCTTCTATATTTGGGGGGCTAAGAGACATAATAATGTGCACCTTCCTAAGTCTCTTGATTTCTTGCCTGATAGTATAAGGTATCTATTTTGGGAAGGATATCCTTCCAGGTCTTTGCCATCAACCTTTCGTCCACTAAATCTTGTTCAGATTTCCATGCAGAACAGTAAAGTTGAAAAACTTTGGGATGGAATCCAGGATCTTgcacatttaaataaaattgatttacgCAACTCTAAGCACTTGATGGAGCTCCCAGATTTCTCCATGGCATCCAATCTTGAATATGCATTTCTTGATGGGTGTACAAGTTTGTGCCAAGTTCATTCAACCATCTTATCTCTCCAGAAGCTTGTTACACTCTCATTATCGAATTGCAAACAGCTCAAGAGTCCTGAAAGCATCATTCAATCAAGACGTCTGGAAGTTCTCAGACTCGAAGGTTGTTCAAGTTTGAAGGAAATTTCAATGATGTCAGAGGATATGAAGATTTTTCATTTAGACAAGACAGCTATTGCTGAATTGCCCTCGTCAATTGGGAGCCTCAATAAGCTTGAAGAGTTGACAATACGCGAGTGTTTTCATCTCAAGAATCTTCCAAATGCGTTGCGTGGCTTGACATCTCTTCAAAGCCTTGATATTTCTGATTGCAGACAAGTTGACACAGAAAAGCTAGCAATCTTGCTTAATGGATTAAGGTCTTTGACATATCTGAATCTAACCAATTGTTGTAACTTATTCCAACTCCCTGAAAACATCAACCTCGTATCAAATTTAGTTATGCTAGATCTATCAGGAAGCAATGTGGAGACTTTGCCAGCCAGCATCATCCATCTGTCACTGTTACAATATATCTGGTTATTTGATTGCCGGAGGCTTCAGTTTTTACCAGAGCTTCCGCCATTCATTGAAGAATTAAATGTCAGAAATTGTTTATCCCTGGAGACATTACTTTTCACTAATTCATTGTCACCTTTGACTTCGGTTTCTGATCAAGTAAAGCCATCTATTTGGCTGGAAAATTGTGTGAAATTGGATGAAGATTCTGTAAAAGCCATGCTGAAGAGAATGAAGGAAGGAACGATTGACAGAATTGTTTACCCAGAAAGCAAGGTTCCAAATTGGTTTAGACATCAAACAACAGACGCTGCCATAACTATTGAGCCTCAATGTCCATCTAGTTCCAATTTATCATGTAGTGCAGTTTTCTGTCTTGTTGTTTCTCTTGTTTCATCACCTGACAAGAACATTGCTTGGGATATTGGATGTAAATACAACATGGCAGATGGTGCAGAGGTTCAACAGACGAGTTTTGACGAACGAGGTTATCGTCACACCACTGGCTTGAAAAGAACTGCATTTGGCATATTGGATCATGTGTTTGTATGGTACAATGATTTGCCTTTATTAGACCACTCAAAGGTTTCATTTGAATTCTTTGTTGAACCTCTAGAGAAGATGGAGGAAGTTGCAATTTCAATAAAAGGGTGTGGGGTGGAGCTTATATATGACATTAAAAATGAACGTGTCAGTGGTTCTTCTGCTGCTAACATCAGTTATGATAAAGAATTGGAAGCACTAGTTATCCCTCCAATACAGAAATCCACATTTCCTGCCCTTTCAACTGCAACCAACTGGAAGAATCAAAGCAAGGGCTTGATTGATATACTCTCTCTTTG 2423 0.3752 MANVIATATGSSSSSFSSAVFYPKKHNQEKIQKWKGALMEAANLSGWHSKNYRTEYELVENIVKNIMQKLNRMYSNDLKNLVGIEHNYACVESMLKIGSRNVRIIGIWGMGGLGKTTLAAVAFAKLSSRYEASCFLANVREEATNHGLNYLRNKLLSELLDDKDVYINDIEMHDLIQEMGKEIVRQESSKSPGRRSRLWNPEEIYDIFKSNKVTDTVEGIILNLSQIKSDIHLSHDTLTKMSNLRLVKFFYIWGAKRHNNVHLPKSLDFLPDSIRYLFWEGYPSRSLPSTFRPLNLVQISMQNSKVEKLWDGIQDLAHLNKIDLRNSKHLMELPDFSMASNLEYAFLDGCTSLCQVHSTILSLQKLVTLSLSNCKQLKSPESIIQSRRLEVLRLEGCSSLKEISMMSEDMKIFHLDKTAIAELPSSIGSLNKLEELTIRECFHLKNLPNALRGLTSLQSLDISDCRQVDTEKLAILLNGLRSLTYLNLTNCCNLFQLPENINLVSNLVMLDLSGSNVETLPASIIHLSLLQYIWLFDCRRLQFLPELPPFIEELNVRNCLSLETLLFTNSLSPLTSVSDQVKPSIWLENCVKLDEDSVKAMLKRMKEGTIDRIVYPESKVPNWFRHQTTDAAITIEPQCPSSSNLSCSAVFCLVVSLVSSPDKNIAWDIGCKYNMADGAEVQQTSFDERGYRHTTGLKRTAFGILDHVFVWYNDLPLLDHSKVSFEFFVEPLEKMEEVAISIKGCGVELIYDIKNERVSGSSAANISYDKELEALVIPPIQKSTFPALSTATNWKNQSKGLIDILSL 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01868 807 PRINTS Disease resistance protein signature 361 377 - -
Bva10g01868 807 PRINTS Disease resistance protein signature 104 119 - -
Bva10g01868 807 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 167 744 - -
Bva10g01868 807 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 36 164 - -
Bva10g01868 807 Pfam Leucine Rich Repeat 295 314 IPR011713 -
Bva10g01868 807 Pfam C-JID domain 616 752 IPR045344 -
Bva10g01868 807 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 167 744 IPR044974 GO:0006952
Bva10g01868 807 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 36 164 IPR044974 GO:0006952
Bva10g01868 807 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 72 227 IPR027417 -
Bva10g01868 807 SUPERFAMILY L domain-like 172 594 - -
Bva10g01868 807 Pfam NB-ARC domain 95 165 IPR002182 GO:0043531
Bva10g01868 807 Gene3D - 69 191 IPR027417 -
Bva10g01868 807 Gene3D - 3 68 IPR035897 -
Bva10g01868 807 Gene3D Ribonuclease Inhibitor 411 608 IPR032675 -
Bva10g01868 807 Gene3D Ribonuclease Inhibitor 207 410 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01868 Bva-Chr10 12523325 12527318 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01868 168 540 WRKY Transcription Factor Family AT4G12020 36.483 1.55e-59 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01868 - - mtr:MTR_4g043630 451.055