Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01860 ATGGGAAAGCTTTCAACTCTGGCTAATCCTTGGTGGACAGGTCAGGTTGGGTTGCCGGACGTAGACCCGGCAGCAAATTCGCCTGGCCTTAACAAACGCCAAACTGACCTCTCCATCAATGAGAGCAGCGGCAGGAGTGGTGGCagagatgatgatgaagatagaGACACCGGAGAGGAGCCCAAAGAAGGTGCAGTTGAGGTTGGAACTCGCAGACCTAGAGGTAGACCTCCCGGATCCAAAAACAAGGCAAAGCCACCCATTTTTGTGACCCGAGACAGTCCAAATGCTCTGAGGAGCCATGTGATGGAGGTAGCTGGTGGAGCTGATGTTGCTGAAAGTGTAGCCCAGTTTGCAAGAAGGCGTCAGCGTGGAGTCTGTGTGCTTAGTGGTAGCGGGTCTGTGGCCAACGTTACTCTCAGGCAACCTGCTGCTCCTGGTGCCGTGGTGGCCCTTCATGGCAGGTTTGAGATTCTGTCCCTAACCGGAGCTTTCCTCCCAGGACCTGCCCCTCCCGGTTCCACCGGACTCACGGTGTACCTCGCAGGAGGACAGGGGCAGGTGGTGGGAGGATGTGTGGTAGGCTCATTAATTGCAGCAGGACCAGTTATGGTCATTGCTGCAACTTTTGCTAATGCAACATACGAGAGGCTACCACTGGATGAGGAGGAAGAGGGAGGAAGTGCCTCGCAAGGAGCCGCAGGAGGCTCGCCACCGGGGATTGGAAGCAGTTTGCAGGCAGGGATTCCAGATCCATCATCTCTGCCTTTATACAATCTGCCACCAAATCTGTTACCCAACGGTGGGCAGGTGGGGCATGAAGCTTTTCCTTGGGCTCATGGGCGGCCATCTTACTA 857 0.5449 MGKLSTLANPWWTGQVGLPDVDPAANSPGLNKRQTDLSINESSGRSGGRDDDEDRDTGEEPKEGAVEVGTRRPRGRPPGSKNKAKPPIFVTRDSPNALRSHVMEVAGGADVAESVAQFARRRQRGVCVLSGSGSVANVTLRQPAAPGAVVALHGRFEILSLTGAFLPGPAPPGSTGLTVYLAGGQGQVVGGCVVGSLIAAGPVMVIAATFANATYERLPLDEEEEGGSASQGAAGGSPPGIGSSLQAGIPDPSSLPLYNLPPNLLPNGGQVGHEAFPWAHGRPSY 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01860 285 Pfam Plants and Prokaryotes Conserved (PCC) domain 99 211 IPR005175 -
Bva10g01860 285 MobiDBLite consensus disorder prediction 28 44 - -
Bva10g01860 285 PIRSF ESCAROLA 21 285 IPR014476 GO:0003680
Bva10g01860 285 ProSiteProfiles PPC domain profile profile. 95 232 IPR005175 -
Bva10g01860 285 CDD DUF296 99 182 IPR005175 -
Bva10g01860 285 MobiDBLite consensus disorder prediction 221 254 - -
Bva10g01860 285 MobiDBLite consensus disorder prediction 1 92 - -
Bva10g01860 285 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 34 285 IPR014476 GO:0003680
Bva10g01860 285 SUPERFAMILY AF0104/ALDC/Ptd012-like 95 223 - -
Bva10g01860 285 PANTHER DNA-BINDING PROTEIN-LIKE 34 285 - -
Bva10g01860 285 Gene3D - 98 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01860 Bva-Chr10 12457649 12458726 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01860 7 285 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 64.912 1.21e-107 312
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01860 - - mesc:110601522 412.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g01860 10 12457649 12458726 Bva10g01860 10 12457649 12458726 ECH