Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01859 ATGTTAAAGAAGGTAGCTTCTGGGTTGTTGATTTCTTCGATCCTCATATGTGTATCTGCTACGGAAAATGTATATCCCAGATGTAATTGTGATGACGAGGGCAGCTGGTGGACGTTTGAGAGTATTTTGGAATGCCAGAGAGTAGGCGATTTCCTTATTGCTGTGGCCTACTTCTCCATTCCCATTGAGCTGCTTTATTTTGTAAGTTGCTCAAATATTCCATTCAAATGGGTACTTAGTCAGTTCATTGCCTTCATTGTTCTGTGTGGATTGACGCATTTACTGAATGGATGGACATATGGTCCTCATTCTTTTCAACTTATGGTGGCACTTACTGTCTTCAAGATTCTCACTGCGTTGGTGTCATGTGCCACTGCTATCACCCTCGTTACTCTCATTCCTTTACTTCTCAAAGTGAAGGTTAGAGAATTCATGCTGAAGAAGAAGACTTGGGATCTTGGACGAGAAGTTGGTAttataatgaaacaaaaggagGCTGCAGTGCATGTAAGAATGCTCACTCAAGAGATTCGTAAGTCACTTGATAGGCATACGATTTTGTACACCACCTTGGTGGAATTATCCAAAACACTGGGTTTGCAAAATTGTGCTGTCTGGATGCCTAATGTTGAGAAAACAGAGATGAACCTGACTCATGAATTAAAcggaaaaaatttcaacttttctaTACCAATTACAGATGCAGATGTTGTAAGAATCAAGGGAAGTGATGAAGTAAATATTCTTAGCACTGACTCCGCTCTTGCTACTGGCAGTAGTGGAATTTCTGGTGAACCAGGACCAGTGGCTGCAATTCGAATGCCAATGCTACGGGTCTGCAATTTTAAAGGGGGAACACCTGAGATGACACAGGCATGTTATGCAATATTAGTCTTAGTTCTCCCTTTTGAGCAGCCTAGATCTTGGAACATTCAGGAGCTGGAGATAATTAAGGCAGTTGCTGATCAGGTAGCTGTTGCTCACTCTCATGCTGCAATTCTTGAAGAGTCCCAACTCATGAGAGAGAAGTTAGAGGAACAAAATCGTGCTTTGCAACAGGCAAGAAGGAATGCTATGATGGCAAGTCAGGCAAGAAGTTCATTTCAGAAAGTAATGAGTGATGGAATGAGGAGGCCAATGCACTCAATTCTGGGTTTGCTTTCAATGATAAGAGATGATGATAATTTGAAGAGTGAACAAAAGCTTATTGTTGATGCAATGCTGAGGACCAGCAATGTCCTATCAAACTTGATAAACGATGCGATGGATAATTCAACAAAAGATGATGGGAGATTTCCATTGGAGATGAGATCTTTCGGGTTACATGCGATGATTAAAGAAGCAGCTTGCCTGGCCAAGTGCATGTGTGTTTATAAGGGCTTTGGTTTTGCAGTTGAGGTTGACAAGTATATGCCTGATAATGTCATGGGTGATGAGAGGAGGGTATTCCAGGTGATTCTGCATATGGTTGGGAGCCTATTGAATGGTCATCATGAGGGTGGAATTCTCGTACTTCGAGTTTTTGTCGAAAGTGGAAGTCAGGGAAGGACAAACTGGAGACCAAGCTCATCTAGTGGGGATGTATATATTAGAATTGAGATAGGGATCAACAGTATTGGTTCGGAATCGGAAAGCTCAGTTTCTTCAGGACAGCCTGGTGGTAGGAAACATACCAGTGATAGAGTTGAGGGCAGATTGAGCTTCAGCATTTGTCAAAGAATTGTTCAGTTGATGCAAGGGAACATATGGTTAATACCAAATGCTAAAGGTTGCCCTCAAAGCATGGCCCTTGTTCTTCGGTTTCAATTACGGCCATCTATTGCTATCTCCATATCTGAGCCTGGAGAATCTTCAGAGCGTTCAGATTCTAATTCTCTCTTCAATGGTCTGCAAGTCCTGCTGGCTGACAATGATGATGTAAATAGAGCCGTGACTCGAAAATTGCTTCAGAAGCTCGGCTGCAATGTAAGTGCAGTTTCTTCTGGATTTGAATGCCTTTCTGTCATAGGATCAGCTGCATCTTCCATTGAAGTCATTATTTTGGACCTTCACATGCCTGAGCTAGACGGCTTTGAAGTTGCCACAAGGATTCGAAAGTACAGAAGCCGAAACTGGCCGGTGATCATCGCCTTGACTGCTAGTGCAGATGAAGATTTGTGGGATAGATGTGTGCAAATCGGTATAAATGGAGTCATCCGGAAACCGGTTTTGTTGCAAGGCATTTCCAGTGAACTCCGGAGAATCCTGATGCAGGGAAATAGGGTACTGTG 2270 0.4211 MLKKVASGLLISSILICVSATENVYPRCNCDDEGSWWTFESILECQRVGDFLIAVAYFSIPIELLYFVSCSNIPFKWVLSQFIAFIVLCGLTHLLNGWTYGPHSFQLMVALTVFKILTALVSCATAITLVTLIPLLLKVKVREFMLKKKTWDLGREVGIIMKQKEAAVHVRMLTQEIRKSLDRHTILYTTLVELSKTLGLQNCAVWMPNVEKTEMNLTHELNGKNFNFSIPITDADVVRIKGSDEVNILSTDSALATGSSGISGEPGPVAAIRMPMLRVCNFKGGTPEMTQACYAILVLVLPFEQPRSWNIQELEIIKAVADQVAVAHSHAAILEESQLMREKLEEQNRALQQARRNAMMASQARSSFQKVMSDGMRRPMHSILGLLSMIRDDDNLKSEQKLIVDAMLRTSNVLSNLINDAMDNSTKDDGRFPLEMRSFGLHAMIKEAACLAKCMCVYKGFGFAVEVDKYMPDNVMGDERRVFQVILHMVGSLLNGHHEGGILVLRVFVESGSQGRTNWRPSSSSGDVYIRIEIGINSIGSESESSVSSGQPGGRKHTSDRVEGRLSFSICQRIVQLMQGNIWLIPNAKGCPQSMALVLRFQLRPSIAISISEPGESSERSDSNSLFNGLQVLLADNDDVNRAVTRKLLQKLGCNVSAVSSGFECLSVIGSAASSIEVIILDLHMPELDGFEVATRIRKYRSRNWPVIIALTASADEDLWDRCVQIGINGVIRKPVLLQGISSELRRILMQGNRVL 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01859 756 CDD HATPase_ETR2_ERS2-EIN4-like 471 599 - -
Bva10g01859 756 PANTHER ETHYLENE RESPONSE SENSOR 2 10 753 - -
Bva10g01859 756 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 419 587 IPR036890 -
Bva10g01859 756 PIRSF Ethylen_sen_hybr_HK 1 756 IPR014525 GO:0004672|GO:0005789|GO:0009723|GO:0038199|GO:0051740
Bva10g01859 756 ProSiteProfiles Response regulatory domain profile. 631 749 IPR001789 GO:0000160
Bva10g01859 756 SMART HisKA_10 364 430 IPR003661 GO:0000155|GO:0007165
Bva10g01859 756 SUPERFAMILY CheY-like 627 749 IPR011006 -
Bva10g01859 756 Gene3D - 431 602 IPR036890 -
Bva10g01859 756 SMART REC_2 630 749 IPR001789 GO:0000160
Bva10g01859 756 MobiDBLite consensus disorder prediction 541 555 - -
Bva10g01859 756 Gene3D - 170 339 IPR029016 -
Bva10g01859 756 ProSiteProfiles Histidine kinase domain profile. 371 605 IPR005467 -
Bva10g01859 756 Pfam Response regulator receiver domain 632 738 IPR001789 GO:0000160
Bva10g01859 756 MobiDBLite consensus disorder prediction 541 561 - -
Bva10g01859 756 Pfam His Kinase A (phospho-acceptor) domain 365 430 IPR003661 GO:0000155|GO:0007165
Bva10g01859 756 Gene3D - 350 430 - -
Bva10g01859 756 Gene3D - 616 753 - -
Bva10g01859 756 SUPERFAMILY GAF domain-like 185 327 - -
Bva10g01859 756 Coils Coil 334 364 - -
Bva10g01859 756 CDD REC_ETR-like 630 745 - -
Bva10g01859 756 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 477 588 IPR003594 -
Bva10g01859 756 PANTHER TWO-COMPONENT SENSOR HISTIDINE KINASE 10 753 - -
Bva10g01859 756 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 349 431 IPR036097 GO:0000155|GO:0007165
Bva10g01859 756 CDD HisKA 362 425 IPR003661 GO:0000155|GO:0007165
Bva10g01859 756 SMART gaf_1 182 338 IPR003018 GO:0005515
Bva10g01859 756 Pfam GAF domain 182 327 IPR003018 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01859 Bva-Chr10 12433741 12437874 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01859 22 749 Miscellaneous Gene Families AT3G04580 56.913 0.0 805
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Bva10g01859 GAF 1.5e-10 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01859 K14509 - gmx:100787425 1219.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g01859 10 12433741 12437874 Bva10g01859 10 12433741 12437874 ECH