Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01858 ATGGAGAATCAAGTTGCTACAATAAACTATAGAAAAGACCACTTATTGCAAACAACTCTGGCTAATCCTTGGTGGACAGGTCAGGTTGGGTTGCCGGCGGTAGACCCGGCAGCGAATTCGCCTGGCCTTAACAAACGCCAAAGCGACCTCTCCATCAATGATAGCAGCGGCAGGAGTGGTGGCagagatgatgatgaagatagaGATACAGGAGATGAGCCCAAAGAGGGTGCAGTTGAGGTTGGAAACCGTAGACCTAGAGGTAGACCACCTGGATCTAAAAACAAGCCAAAACCACCCATTTTTGTGACCCGGGACAGCCCAAATGCTCTGAGGAGCCATGTGATGGAGGTAGCTGGTGGAGCTGATGTTGCCGAAAGTGTAGCCCAGTTTGCAAGAAGGCGTCAGCGTGGGGTCTGTGTGCTTAGTGGTAGCGGATCAGTTGCCAACGTTACGCTCAGACAACCTGCTGCTCCGGGTGCCGTGGTGGCTCTTCACGGCAGGTTTGAGATTCTATCTCTGACCGGAGCCTTCCTCCCAGGACCTGCCCCTCCTGGTTCTACAGGACTCACGGTGTACCTTGCAGGAGGACAGGGGCAGGTGGTGGGAGGATGTGTCGTAGGCTCATTAGTTGCAGCAGGACCAGTTATGGTCATTGCTGCAACTTTTGCTAATGCAACATATGAGAGACTACCACTGGATGATGACGATGAGGGTGGAAGTGCCTCGCAAGGAGCCGGGGGAGGCTCGCCACCGGGGATTGGAAGCAGTGGGGGCCAATTGCAGGCAGGGATTCCAGATCCATCATCTCTACCTTTATACAATCTTCCACCAAATCTGTTACCCAACGGTGGGCAGGTGGGGCATGAAGCTTTTCCTTGGGCTCATGGGCGGCCACCTTATTA 905 0.5271 MENQVATINYRKDHLLQTTLANPWWTGQVGLPAVDPAANSPGLNKRQSDLSINDSSGRSGGRDDDEDRDTGDEPKEGAVEVGNRRPRGRPPGSKNKPKPPIFVTRDSPNALRSHVMEVAGGADVAESVAQFARRRQRGVCVLSGSGSVANVTLRQPAAPGAVVALHGRFEILSLTGAFLPGPAPPGSTGLTVYLAGGQGQVVGGCVVGSLVAAGPVMVIAATFANATYERLPLDDDDEGGSASQGAGGGSPPGIGSSGGQLQAGIPDPSSLPLYNLPPNLLPNGGQVGHEAFPWAHGRPPY 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01858 301 PIRSF ESCAROLA 33 301 IPR014476 GO:0003680
Bva10g01858 301 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 20 58 301 - -
Bva10g01858 301 MobiDBLite consensus disorder prediction 34 109 - -
Bva10g01858 301 ProSiteProfiles PPC domain profile profile. 108 247 IPR005175 -
Bva10g01858 301 SUPERFAMILY AF0104/ALDC/Ptd012-like 108 235 - -
Bva10g01858 301 Gene3D - 111 240 - -
Bva10g01858 301 MobiDBLite consensus disorder prediction 232 279 - -
Bva10g01858 301 MobiDBLite consensus disorder prediction 41 57 - -
Bva10g01858 301 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 58 301 IPR014476 GO:0003680
Bva10g01858 301 CDD DUF296 112 195 IPR005175 -
Bva10g01858 301 Pfam Plants and Prokaryotes Conserved (PCC) domain 112 224 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01858 Bva-Chr10 12417187 12418979 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01858 20 301 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 64.583 5.57e-109 316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01858 - - mesc:110601522 400.593