Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01856 ATGGTGATCCACGAAGACGAATCCAAGAGGGTACAATTCCCATTGGGCTCTGGCTGCTACCAGCTCCTTGAAGAGATCGGTCAGGGTGCCAGTGCTGTTGTCTACAAGGCAAACTGCGTGCCCATGAACTCTGCTGTGGTGGCCATCAAAGTGATTGATCTTGATCAATCTCGAGCTGATTTTGATGCAGTTCGTCGTGAAGCTAAGATGCTTGCTCTGCTTTCTCATCCCAACATTCTCAACGCCCACTGTTCTTTCACTGTGGGTCATCGTCTCTGGGTGGTGATGCCTTACATGGATGGTGGGTCTCTACTATCTTTAATTTCCCACTCTTTCCCAGGTGGGTTGCCGGAGACATGCATTGCGGTTGTACTGAAGGAGATTCTGAATGCTCTGTTTTATCTCCATGGCCAAGGTCACCTCCACAGAGACATCAAGGCTGGAAACATTCTCATCGACTCAAATGGGTTGGTGAAGCTCGCTGATTTTGGCGTTTCCACCTCCATTTATGAGTCGCATTTGTCGGCTGGGCTGTTATCTTCTTCGTCGTGTCCATCTCTCATGCTCAAGGATTTCGCAGGCACGCCTTATTGGATGGCTCCAGAGGTGATTCACTCCCACACAGGATACAGTTTCAAGGCTGATATATGGTCGTTTGGGATCACTGCGCTGGAGTTAGCCCATGGAAGGCCTCCTCTATCTCATCTTCCTCCTTCAAAATCCATGATGCTAAAGATGACAAAGCGTTTTCGCTTTTCTGATTTAGCTAAGCATAATAGGGGTGATGATGgcaagaaattttcaaaaccttTTAAGAATTTAGTAGGTGCTTGTCTCCATCAAGATCCTTCAAAGAGACCCACTGCTGAGAAATTGTTGAATCATCCTTTCTTCAAGAACTGCAAGGGCAATGATTATTTGGCCAAGACACTGCTTCAAGGGTTGCCAAGCGTTGAGGAAAGGTACCGCAAAAGTAAGATTCTTTATGAGAAGCGTACTGTTCAAGAGGATGAGGAAGGTCACCCAGTGGGCCAAATTGTAAAACAGAGAAGAATTAGTGGTTGGAACTTTAATGAAGATGGATTGGAGTTTGACCCAGTATTCCCAGCAGAGCccaaagaagatgaaattgtTAAGCAAGTTCAGTTTGGGGGCGAAATGATTATCAATGAACGACTTGGCGATGACTTGGGTGAGTCAGAGGATACTGCTGTTGCTGTGGCTAAGGGTGTGTACCCCAGCGAGCCTGTTGCTAAATCAGGAGCTATGAACCAGAGTGAAGGAGTTGTAGGTTCGGGTAGAATTGTTAGTCCACAGAGGGAACACATGCTATCTGTTTTGGCTGTGTTGAAGGAAAGCTTGGTGCAACAATTGGCAATGGTTAAGACAATTCAAGATTTTGTAGCAGGATCAGAAGACCTGGTTATCACGGAGGAGTGCATGGCGCGAAGTGTACAAATGCTGGATATAGAAGTGGCTAATGCGAAGAGGAAGAACATGGCATTGCAGCTGCAGCTGAATAGAATtcctgctgctgctgcttctgCTAATGCTGCAGGTGGTGCTGTCAAGGAAAGTGCTTTTGGTGGTATTTCTGCTAAAAGAACTTTTGGTGATGCTGCTGAGGAAAGTGCTCTTGGTTATGTTTCTGCTGGTGAATTTGCTGATGTTTCTGCTGTGGGAAGTCTTGATGGTTCATCCGAGGAAAGCGCTTTTGGTGATGTTTCCGCTGAGGAAACTGCTTTCGTTGATGTTTCCGTTGAGGGAAGTGCTGATGATTCTGCTTA 1787 0.4494 MVIHEDESKRVQFPLGSGCYQLLEEIGQGASAVVYKANCVPMNSAVVAIKVIDLDQSRADFDAVRREAKMLALLSHPNILNAHCSFTVGHRLWVVMPYMDGGSLLSLISHSFPGGLPETCIAVVLKEILNALFYLHGQGHLHRDIKAGNILIDSNGLVKLADFGVSTSIYESHLSAGLLSSSSCPSLMLKDFAGTPYWMAPEVIHSHTGYSFKADIWSFGITALELAHGRPPLSHLPPSKSMMLKMTKRFRFSDLAKHNRGDDGKKFSKPFKNLVGACLHQDPSKRPTAEKLLNHPFFKNCKGNDYLAKTLLQGLPSVEERYRKSKILYEKRTVQEDEEGHPVGQIVKQRRISGWNFNEDGLEFDPVFPAEPKEDEIVKQVQFGGEMIINERLGDDLGESEDTAVAVAKGVYPSEPVAKSGAMNQSEGVVGSGRIVSPQREHMLSVLAVLKESLVQQLAMVKTIQDFVAGSEDLVITEECMARSVQMLDIEVANAKRKNMALQLQLNRIPAAAASANAAGGAVKESAFGGISAKRTFGDAAEESALGYVSAGEFADVSAVGSLDGSSEESAFGDVSAEETAFVDVSVEGSADDSA 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01856 595 SMART serkin_6 20 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g01856 595 ProSitePatterns Protein kinases ATP-binding region signature. 26 50 IPR017441 GO:0005524
Bva10g01856 595 SUPERFAMILY Protein kinase-like (PK-like) 18 323 IPR011009 -
Bva10g01856 595 PANTHER SERINE/THREONINE-PROTEIN KINASE BLUS1 5 517 - -
Bva10g01856 595 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 5 517 - -
Bva10g01856 595 Gene3D Phosphorylase Kinase; domain 1 8 97 - -
Bva10g01856 595 Pfam Protein kinase domain 20 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g01856 595 ProSiteProfiles Protein kinase domain profile. 20 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g01856 595 Coils Coil 485 505 - -
Bva10g01856 595 Gene3D Transferase(Phosphotransferase) domain 1 102 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01856 Bva-Chr10 12396696 12398833 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01856 10 500 MAP Kinase Kinase Kinase Kinase AT4G14480 52.789 2.08e-172 496
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Bva10g01856 Pkinase 6.5e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01856 K08835 - hbr:110642110 575.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g01856 10 12396696 12398833 Bva10g01856 10 12396696 12398833 ECH