Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01839 ATGGAAGGATTTTTCCCCGAGAGATTTCTGGGTGAAATTTTCTGGGATGAGCTTCTTCCTTCTGCTTCAAGTGAAAGCACTACGGTTCCAGGGATCGATGTTCCATCCAGAATTGAATTCGAGCAAGAAAGTTTTGATCTTGGATCTTCCAGTTCCCAGAACTTGATAGAAGAAGCTCCTCACCCTCCAAATCAAAGTGCTTTTATCCCATATTCGGGCATACCCAGAACTGGATTTGGGCATGAAATTTCCCAGAATGCATCAAATTCCCAGAATTTGAACAATAGAATGATTGGATTCTTGAGAAGAGGTTTACCAGGAGAGAGAAGAAACGTCGAAGAACACGAAAGGGATCGCGGTTTCCGGCATATGATTAACGAGAGAATGAGGAGGAAGAGGCAGAGGCAGTGTTGCTTAGACCTGCATTCCATGTTACCTGATGGAACCAAATCTGATAATAATTCAGTAATTTCAGTGGCAAAGAGGGAAATTGAACGGCTTCGACGTTGCAGGGAAGAGTTgcagagagaaaattttaaacttgaagGCAATCTTCAAGCTCTAGTggagaagaaaagagttggGGGAACCAGAATTCAATTCCCAATTCCCAATTCCACATCTGGAATTGATTCAATGCTTGAGATTCTTAACTGCTTGAAAAGCTTTAGTGTTAACATAATTAACACTAATTACTCTTCTGAACAGCTGCTTGCAGTGTTAGAGACAGAAACAGAgaTTCCAGATGGAGAGATGGAAAGTATAATTGAGAGAAAACCGAAGGAAGTTGAGTGGAAGTTGCAATCCCAGCTCTTAGAAAGTTCCTATAATGAAGAATG 839 0.3921 MEGFFPERFLGEIFWDELLPSASSESTTVPGIDVPSRIEFEQESFDLGSSSSQNLIEEAPHPPNQSAFIPYSGIPRTGFGHEISQNASNSQNLNNRMIGFLRRGLPGERRNVEEHERDRGFRHMINERMRRKRQRQCCLDLHSMLPDGTKSDNNSVISVAKREIERLRRCREELQRENFKLEGNLQALVEKKRVGGTRIQFPIPNSTSGIDSMLEILNCLKSFSVNIINTNYSSEQLLAVLETETEIPDGEMESIIERKPKEVEWKLQSQLLESSYNEE 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01839 279 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 116 185 IPR036638 GO:0046983
Bva10g01839 279 Coils Coil 157 191 - -
Bva10g01839 279 PANTHER TRANSCRIPTION FACTOR BHLH041-RELATED-RELATED 38 271 IPR044658 -
Bva10g01839 279 PANTHER TRANSCRIPTION FACTOR BHLH92 38 271 - -
Bva10g01839 279 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 118 167 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01839 Bva-Chr10 12285861 12287139 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01839 63 247 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G43650 33.161 1.46e-25 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01839 - - gmx:100815874 216.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g01839 10 12285861 12287139 Bva10g01839 10 12285861 12287139 ECH