Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01817 ATGTCCAAGACAAGGGAAGAACAGAAAGGAAACACCAAAATGACAAGCAGCAAACAGCAACACGTCTCTCTTCTCTTGCTCTTCCTCCTatgctttcttctccttcttcctctCTCCCATGCCCAAAGGGAACCAAACTCCACAGGCTACCAGTGCACAGAAAACCAGAACCAAACAGGTAATTCATGTCAAACCTATGTTTTCTACAGAGCCAAGTCCCCAGATTTCCTAGACCTTGCCTCCATTGGAGACCTCTTCTCCGTTAGCCGCCTCATGATTTCGAATCACAGCAACATATCTTCCCCTTCTGCTCCTCTAATTCAAGATCAACCTCTCTTTGTTCCAATTTCTTGCTCCTGCAACAACATAAACTCCACTTTTGGCTCCATCTCTTATGCTGGTCTCTCATACATCATCAAGCCCAACGACACTTTCTACCTTGTCTCCACCAACAAGTTCCAGAATCTCACGACCTACGAATCTGTTGAGCTTGTCAACCCAACTCTTGTCGCGACAGACCTCCAAATTGGCACTAACGCTATATTTCCTGTCTTCTGCAAGTGCCCCAACAGCACCCAGTTGCAGAATCGGCAGAATTACCTGATTTCCTATGTTGTTCAGCCTTCTGACAATGTTTCATCGATTGCATCAACGTTTGGGACAGACCCACAATCTATAATTGATATCAATGGCAATAATCCTGAGCTCTTTGACACAATCTTTGTTCCGGTGACCCAGTTGCCGGAATTATCACAGCCTGCCACAGCTCCTTCTCCATCTCCTACTGTTTCTGCTCCTGCAGAATCTGATGACAGAAAAGGAACTGTGATAGGGTTGGCAATTGGATTGGGGATTATTGGGCTTCTGTTGATTTTGGTTATTGGGGTGTGGATTTACAGAGAGGTTCTATTCAAGGATAAACTGTGGGTAATGGGAGATGAGGAGAGACAGAGGCGGCAATTCTATGAAGGGACAGAGAAGAaggggatgaaggaagagggCATGAAACTGATGGCTAATGTGTCAGATTGCTTGGACAAGTATAGGGTTTTTGGAATTGAAGAATTGAGAGAAGCCACTAATGGATTCCATGACAGTTTCTTGATTCAAGGGTCTGTGTATAAAGGGACAATCGCTGGAGAGGTCTTCGCAAtcaagaagatgaagtggaATGCATATGAGGAGCTGAAGATCTTACAGAAGGTCAATCATGGGAATTTGGTGAAGCTGGAGGGTTTCTGCATAGACACAGAAGAAGCAAACTGCTATCTAATCTACGAATATGTAGAAAATGGATCTCTCTATTCATGGCTGCACGAGCACAAGGACGAGAAGCTCAACTGGAAAACAAGGCTACGCATTGCCATTGACGTTGCCAACGGTCTCCAATACATCCACGAGCACACGAGGCCGCGGGTTGTGCACAAAGACATCAAGAGCAGTAACATTCTCTTGGACTCAAACATGAGAGCCAAGATTGCCAACTTTGGCTTAGCAAAATCTGGGTGCAATGCCATCACAATGCACATTGTGGGCACTCAGGGCTATATTCCCCCTGAGTATCTTGCAGATGGCGTCGTGTCCACGAAAATGGATGTGTTTTCCTTTGGCGTTGTGCTGCTTGAGCTCATTTCGGCCCGGGAAGCCATTGATGAGGATGGGAATCTCCTTTGGGCAAGTGCTACTAGGGTTTTTGAAGGGAATGATGAGAAAGAGAAGGCAAGGAAATTGATGGAATGGATAGATAGGGATATTTTGAGGGAGACATGTTCAATGGAGAGCTTGATGAGTGTTCTCAATATGGCCCTCGGTTGTTTGCATAGAGACCCTTCAAAGAGGCCAAGTATGGTGGAGACCGTTTATACACTTAGTAAAAGTGAAGAGGCTGGCTTTGAAAGCTCAGATGATGGACTAGGCACCCCAAAGCTAACAGCTAGATG 1940 0.4418 MSKTREEQKGNTKMTSSKQQHVSLLLLFLLCFLLLLPLSHAQREPNSTGYQCTENQNQTGNSCQTYVFYRAKSPDFLDLASIGDLFSVSRLMISNHSNISSPSAPLIQDQPLFVPISCSCNNINSTFGSISYAGLSYIIKPNDTFYLVSTNKFQNLTTYESVELVNPTLVATDLQIGTNAIFPVFCKCPNSTQLQNRQNYLISYVVQPSDNVSSIASTFGTDPQSIIDINGNNPELFDTIFVPVTQLPELSQPATAPSPSPTVSAPAESDDRKGTVIGLAIGLGIIGLLLILVIGVWIYREVLFKDKLWVMGDEERQRRQFYEGTEKKGMKEEGMKLMANVSDCLDKYRVFGIEELREATNGFHDSFLIQGSVYKGTIAGEVFAIKKMKWNAYEELKILQKVNHGNLVKLEGFCIDTEEANCYLIYEYVENGSLYSWLHEHKDEKLNWKTRLRIAIDVANGLQYIHEHTRPRVVHKDIKSSNILLDSNMRAKIANFGLAKSGCNAITMHIVGTQGYIPPEYLADGVVSTKMDVFSFGVVLLELISAREAIDEDGNLLWASATRVFEGNDEKEKARKLMEWIDRDILRETCSMESLMSVLNMALGCLHRDPSKRPSMVETVYTLSKSEEAGFESSDDGLGTPKLTAR 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01817 646 Gene3D Transferase(Phosphotransferase) domain 1 429 636 - -
Bva10g01817 646 SUPERFAMILY Protein kinase-like (PK-like) 352 622 IPR011009 -
Bva10g01817 646 ProSiteProfiles Protein kinase domain profile. 322 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g01817 646 Pfam Protein kinase domain 371 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g01817 646 PANTHER - 25 643 - -
Bva10g01817 646 Pfam LysM domain 204 232 IPR018392 -
Bva10g01817 646 MobiDBLite consensus disorder prediction 250 270 - -
Bva10g01817 646 CDD LysM 202 231 IPR018392 -
Bva10g01817 646 MobiDBLite consensus disorder prediction 250 265 - -
Bva10g01817 646 Gene3D Phosphorylase Kinase; domain 1 335 428 - -
Bva10g01817 646 MobiDBLite consensus disorder prediction 627 646 - -
Bva10g01817 646 ProSitePatterns Serine/Threonine protein kinases active-site signature. 473 485 IPR008271 GO:0004672|GO:0006468
Bva10g01817 646 Gene3D LysM domain 188 250 IPR036779 -
Bva10g01817 646 ProSiteProfiles LysM domain profile. 202 248 IPR018392 -
Bva10g01817 646 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 25 643 - -
Bva10g01817 646 SMART serkin_6 367 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01817 Bva-Chr10 12084257 12087251 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01817 49 625 Receptor kinase-like Gene Family AT2G23770 34.118 3.09e-84 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Bva10g01817 Pkinase 4.2e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01817 - - lang:109352405 856.284