Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01813 ATGGACCCTGCGGTGCCACGGCCCACcccgtcgccgcgatccgcaGCTACCGTACTCGGGAAGTACCAGCTGATCCGCCTTCTCGGTCGCGGTAGCTTTGCTAAAGTTTACCAAGGCAAATCGTTGATAGACAACTCTACCGTCGCCGTTAAAATCATCGACAAGGCCAAAACTGACGCTGCCATGGAACCTCGCATTGTCCGTGAAATAGACGCCATGCGCCGCCTCCAACACCACCCGAACATCATCAAAATCCACGAGGTCTTGGCTACAAAATCCAAGATCTACCTCATCGTGGAGTTCGCTGCCGGCGGAGAGCTCTTCGCGAAAATCTCCCGCAAAGGTCGGTTAACTGAACCGGTGGCGCGCCGTTACTTCCAGCAATTGGTCTCGGCGCTCTGTTTCTGCCACCAGACCGGCGTCGCACACCGTGACCTTAAGCCACAGAATCTCCTGTTGGACAAGGACGGGAACCTAAGGGTCTCGGATTTCGGACTATCCGCTTTACCTGAACAGCTGAAAAACGGGATGCTGCACACGGCTTGTGGGACGCCGGCTTACACGGCTCCCGAGATCCTTTCCCGGCGCAGCTACGACGGCTCGAAAGCCGATGCATGGTCTTGCGGGCTCATCCTATACGTTCTCCTCGCCGGCTACCTCCCATTCGACGACTCAAATATCCCGGCGATGTGCAAGAGAATCAGCCGGCGCAACTACCAGTTCCCGGAGTGGATTTCCAAACCGGCGCGTTACGTAATTTACCATCTCCTCGACCCGAACCCGGACACCCGAATGAGCTTAGAATCCCTATATCAAAACCCATGGTTCAAGAAGCAGCTCAAACCGAAACCCGAAGAGAGTCTATTCGAATCGGGTCCATACACAAAATCATACCACCACAAATCCGATTTTTTATCATCGGGCGTGAACGCCTTTGACATAATTTCCATGTCTTCGGGTCTGGACTTGAGGGGGCTGTTCGAAACGACGCCGGATAGCAGGAAGGAGAAGAGGTTCACGTCGAAGGGTTCGATAGAGAAGGTGGAGGATAGGGTGAAGGAGATTGGAGgggatttagggtttaagatcgagaaagggaaaaatggGGCAATTGGGTTAGGGAAAGGGAAGGTTGTTTTGGTAGTCGAGGTGTTTGAGATTGTGCCTGAACTAGTTTTGGTGGCGGTGAAGGTGGTGGACGGGGGAATAGAGTTTGAGGAAGTTCACTGGGGGAATTGGAAAGCTGGGTTGCAAGAGATTGTTGTTTCTTGGCACAGTGAAGCattgta 1289 0.5089 MDPAVPRPTPSPRSAATVLGKYQLIRLLGRGSFAKVYQGKSLIDNSTVAVKIIDKAKTDAAMEPRIVREIDAMRRLQHHPNIIKIHEVLATKSKIYLIVEFAAGGELFAKISRKGRLTEPVARRYFQQLVSALCFCHQTGVAHRDLKPQNLLLDKDGNLRVSDFGLSALPEQLKNGMLHTACGTPAYTAPEILSRRSYDGSKADAWSCGLILYVLLAGYLPFDDSNIPAMCKRISRRNYQFPEWISKPARYVIYHLLDPNPDTRMSLESLYQNPWFKKQLKPKPEESLFESGPYTKSYHHKSDFLSSGVNAFDIISMSSGLDLRGLFETTPDSRKEKRFTSKGSIEKVEDRVKEIGGDLGFKIEKGKNGAIGLGKGKVVLVVEVFEIVPELVLVAVKVVDGGIEFEEVHWGNWKAGLQEIVVSWHSEAL 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01813 429 ProSiteProfiles Protein kinase domain profile. 22 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g01813 429 ProSiteProfiles NAF domain profile. 304 328 IPR018451 GO:0007165
Bva10g01813 429 SMART serkin_6 22 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g01813 429 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 14 427 - -
Bva10g01813 429 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
Bva10g01813 429 Gene3D Transferase(Phosphotransferase) domain 1 12 310 - -
Bva10g01813 429 Pfam NAF domain 309 365 IPR004041 GO:0007165
Bva10g01813 429 PANTHER SERINE/THREONINE KINASE 14 427 - -
Bva10g01813 429 ProSitePatterns Protein kinases ATP-binding region signature. 28 51 IPR017441 GO:0005524
Bva10g01813 429 CDD STKc_AMPK-like 21 275 - -
Bva10g01813 429 Pfam Protein kinase domain 22 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g01813 429 CDD CIPK_C 310 418 - -
Bva10g01813 429 SUPERFAMILY Protein kinase-like (PK-like) 18 295 IPR011009 -
Bva10g01813 429 Gene3D Kinase associated domain 1, KA1 311 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01813 Bva-Chr10 12058913 12060492 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01813 4 429 Miscellaneous Gene Families AT3G23000 56.522 1.85e-166 473
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Bva10g01813 Pkinase 1.9e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01813 K12761 - gmx:100784173 592.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g01813 10 12058913 12060492 Bva10g01813 10 12058913 12060492 ECH