Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01792 ATGCCTGTGAGGCAGATGAAGGAAAGCTCCGAGCAACACCTAGTGATCAAAACCCATTTGCAAAACGCCATTAATCCAGTGAAGAAGGCTCCAAAAACTGTCCAAAATGGTAAAGGGCCACCGTCACAAGAACCGCATAACGCCAAACCGCATAGCCAGACTTCACCCCAGGCAAAGAACAGAGGCAGAAGAAGGGGAAGAGGTGGCCGGAAATCCGATCAAGGCGACATTTTGATGCGGCCCAGTTCCCGGCCATGCACGGTGGCGAATAAGCCAGCATCAGAAAACCAGGCTCTGCTAGCAAACACTGCAAATGGGTCCCTCCCCAATGGCGGCAACAACTGCGATATAGAGATGGGTCTTCCCAATTTTCCTTCTTCGAGCAAGTCTTTGAGCTTCGCTCCAAGGCCTGGGTACGGTCAAGTTGGGACAAAATGCATTGTGAAGGCTAACCATTTCTTTGCAGAGTTACCAGACAAGGACCTGAACCAGTATGATGTTACTATTACCCCTGAAGTGTCTTCGAGAACTGTAAACAGAGCCATCATGGCAGAACTAGTGAGGTTGTACAAAGAGTCTGACTTGGGGATGAGACTTCCAGCTTATGATGGCAGAAAAAGTCTGTACACAGCGGGGGAGCTTCCGTTTGCAAGGAGAGAGTTTAAGGTTAAACTTATAGATGACGAAGATGGAGTCAATGGTCCCAAaagagaaagagagtacAGAGTGGTGATCAAGTTTGCCGCTCGGGCAAACTTGTATCACTTGGGCCAGTTTTTAGCTGGTAAGCGTGCTGATGCTCCACAGGAGGCACTTCAAATTCTTGACATTGTATTAAGAGAGCTATCAAATAAGAGGTATTGCCCCATTGGGAGGTCCTTCTTTTCACCTGATATTCGAACACCCCAACGTCTTGGAGAGGGGTTGGAATCATGGTGTGGATTTTACCAGAGCATAAGGCCTACTCAGATGGGCCTGTCACTCAATATTGATATGGCTTCTGCCGCATTTATTGAGCCTCTTCCAGTAGTGGAGTTTGTTGGCCAGCTATTGGGAAAAGATGTGTTATCAAGGCCATTATCTGATGCAGATCGTGTAAAGATTAAGAAAGCCCTTAGAGGAGTTAAAGTTGAAGTAACACACAGAGGACATGTACGAAGAAAATATCGTGTTTCAGGATTGACTTCTCAACCCACAAGAGAACTTGTGTTTCCTGTTGATGATAACTCTACTATGAAGTCAGTGGTTGAATACTTCCAAGAGATGTATGGTTTCACTATTCAGCACACTCACCTTCCTTGTCTACAAGTGGGAAATCAGAAAAAGGCAAACTATTTACCTATGGAGGCCTGCAAAATTGTTGAGGGCCAACGTTGTACGAAAAGGTTGAATGAGAAGCAAATTACTGCTCTTCTGAAAGTTACTTGTCAGAGACCTCGGGATCGGGAAAATGACATTTTGCGGACAATTCAACATAATGCTTATGATCAAGATCCCTATGCAAAGGAATTTGGGATTAAAATCAGCGAAAAGCTAGCTTCTGTTGAAGCACGGATTCTTCCTGCCCCTTGGCTGAAATATCATGAAACTGGCAAAGAAAAGAACTGTTTACCCCAAGTTGGTCAGTGGAATATGATGAACAAGAAAATGATTAATGGGATGACTGTTAGCCGATGGGcatgtataaatttttcacGGAGTGTGCAAGATAGTGTTGCTCGCACTTTTTGTAATGAGCTTGCTCAAATGTGTCAAGTATCTGGCATGGAATTTTATCCTGAGCCTGTGATCCCAATCTACAATGCCAAGCCAGAGCAGGTGGAGAAAGCCTTGAAGCATGTTTATCATGTGTCAATGAACAAaactaaaggaaaagaattggAGCTTTTATTAGCAATATTGCCGGATAATAATGGGTCTCTATATGGAGATCTCAAGCGCATATGTGAAACCGAGCTTGGTTTGATATCACAATGCTGTTTGACAAAACATGTCTTTAAGATCACCAAACAGTACTTGGCTAATGTGTCTCTAAAGATAAATGTTAAGATGGGAGGTAGAAACACTGTTCTACTTGATGCTATAAGCTGCAGAATACCATTAGTTAGTGACATTCCAACCATAATATTTGGAGCAGATGTTACCCACCCTGAAAATGGGGAAGACTCTAGTCCTTCAATAGCAGCTGTTGTAGCATCCCAGGACTGGCCTGAAGTTACAAAATATGCTGGTTTAGTTTGTGCTCAAGCTCACAGACAGGAACTTATACAAGATTTGTACAAAACTTGGCATGACCCAGTTCGTGGAACAGTTAGCGGTGGCATGATCCGGGATCTTTTGGTTTCCTTTAGAAAGGCAACAGGACAGAAGCCACTTAGGATTATATTTTACAGGGATGGTGTAAGTGAAGGGCAATTTTACCAAGTTCTACTTTATGAGTTGGATGCTATCCGGAAGGCATGTGCTTCTTTAGAACCAAACTATCAGCCGCCAGTAACTTTCATTGTCGTACAAAAAAGACATCATACTAGATTGTTTGCAAACAACCATAGGGACAGGAGCAGCACAGATAAGAGTGGGAATATATTGCCCGGCACTGTTGTCGATTCTAAAATCTGTCATCCATCGGAGTTTGATTTTTATCTCTGCAGTCATGCTGGCATTCAGGGGACAAGTCGACCGGCTCATTATCATGTTCTATGGGATGAGAACAACTTCACAGCTGATGGAATTCAATCTTTGACAAACAACCTGTGTTATACATATGCTAGGTGTACACGCTCTGTGTCTGTCGTTCCTCCTGCATATTATGCTCATTTAGCAGCATTCCGGGCCCGATTCTACATGGAGCCAGAAGTGCAGGAGAACAGCTCTTCCGGCAGTGGCGGCAGTCCTGGCGAAAAAGTGGCAATGCGAACCGGAGAGTCCGGTGTGCGGCCATTGCCGGCGTTGAAAGATAATGTCAAGAGAGTGATGTTTTACTGCTA 2987 0.4359 MPVRQMKESSEQHLVIKTHLQNAINPVKKAPKTVQNGKGPPSQEPHNAKPHSQTSPQAKNRGRRRGRGGRKSDQGDILMRPSSRPCTVANKPASENQALLANTANGSLPNGGNNCDIEMGLPNFPSSSKSLSFAPRPGYGQVGTKCIVKANHFFAELPDKDLNQYDVTITPEVSSRTVNRAIMAELVRLYKESDLGMRLPAYDGRKSLYTAGELPFARREFKVKLIDDEDGVNGPKREREYRVVIKFAARANLYHLGQFLAGKRADAPQEALQILDIVLRELSNKRYCPIGRSFFSPDIRTPQRLGEGLESWCGFYQSIRPTQMGLSLNIDMASAAFIEPLPVVEFVGQLLGKDVLSRPLSDADRVKIKKALRGVKVEVTHRGHVRRKYRVSGLTSQPTRELVFPVDDNSTMKSVVEYFQEMYGFTIQHTHLPCLQVGNQKKANYLPMEACKIVEGQRCTKRLNEKQITALLKVTCQRPRDRENDILRTIQHNAYDQDPYAKEFGIKISEKLASVEARILPAPWLKYHETGKEKNCLPQVGQWNMMNKKMINGMTVSRWACINFSRSVQDSVARTFCNELAQMCQVSGMEFYPEPVIPIYNAKPEQVEKALKHVYHVSMNKTKGKELELLLAILPDNNGSLYGDLKRICETELGLISQCCLTKHVFKITKQYLANVSLKINVKMGGRNTVLLDAISCRIPLVSDIPTIIFGADVTHPENGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYKTWHDPVRGTVSGGMIRDLLVSFRKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIVVQKRHHTRLFANNHRDRSSTDKSGNILPGTVVDSKICHPSEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPEVQENSSSGSGGSPGEKVAMRTGESGVRPLPALKDNVKRVMFYC 995
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01792 995 SUPERFAMILY PAZ domain 335 495 IPR036085 GO:0005515
Bva10g01792 995 SMART PAZ_2_a_3 345 477 IPR003100 GO:0005515
Bva10g01792 995 MobiDBLite consensus disorder prediction 954 978 - -
Bva10g01792 995 MobiDBLite consensus disorder prediction 36 57 - -
Bva10g01792 995 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 60 994 - -
Bva10g01792 995 Pfam PAZ domain 367 471 IPR003100 GO:0005515
Bva10g01792 995 SMART Piwi_a_2 629 950 IPR003165 GO:0003676
Bva10g01792 995 SMART DUF1785_2 288 340 IPR014811 -
Bva10g01792 995 Gene3D paz domain 334 460 - -
Bva10g01792 995 Pfam Mid domain of argonaute 538 615 IPR032473 -
Bva10g01792 995 PANTHER PROTEIN ARGONAUTE 10 60 994 - -
Bva10g01792 995 Gene3D - 519 692 - -
Bva10g01792 995 Gene3D - 698 995 IPR036397 GO:0003676
Bva10g01792 995 Pfam Piwi domain 630 949 IPR003165 GO:0003676
Bva10g01792 995 MobiDBLite consensus disorder prediction 1 90 - -
Bva10g01792 995 CDD Piwi_ago-like 499 949 IPR045246 -
Bva10g01792 995 CDD PAZ_argonaute_like 340 454 - -
Bva10g01792 995 ProSiteProfiles Piwi domain profile. 629 950 IPR003165 GO:0003676
Bva10g01792 995 ProSiteProfiles PAZ domain profile. 341 455 IPR003100 GO:0005515
Bva10g01792 995 Pfam Argonaute linker 2 domain 481 527 IPR032472 -
Bva10g01792 995 Pfam N-terminal domain of argonaute 145 279 IPR032474 -
Bva10g01792 995 SUPERFAMILY Ribonuclease H-like 619 950 IPR012337 -
Bva10g01792 995 Pfam Argonaute linker 1 domain 289 338 IPR014811 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01792 Bva-Chr10 11880356 11888874 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01792 1 995 Eukaryotic Initiation Factors Gene Family AT5G43810 82.044 0.0 1672
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01792 K11593 - qsu:111993907 1839.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g01792 10 11880356 11888874 Bva10g01792 10 11880356 11888874 ECH