Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01783 ATGAATCCTTATCGCAGTGCGAAGGAGTTTCGTGGTTCAAGTTCGTCTTTTTCTGGAGAGCAGCATCACATGCTTCCTCCTCAGCCAATGCAAGGACTTCACGAAACTGGCCCTCCACCATTTCTCACCAAAACTTATGATATCGTTGAAGACATTTCCACAAATCACATAATCTCATGGAGCAGAGGGAATAACAGCTTCGTCGTGTGGGATCCCCAGGCCTTCTCCTTGAGTCTTCTTCCCAGATACTTCAAGCACAATAATTTCTCCAGCTTTGTCAGGCAGCTTAATACATATGGGTTTAGAAAGGTTGATCCAGATAGGTGGGAGTTTGCTAATGAAGGGTTTTTGAGAGGGCAAAGGCATCTTTTGAAGAATATTAGGAGAAGGAAAGCTCTTCAAACTCAATGTTCACAGCAAACACTAGACCCTTGTGTTGAAGTGGGACGGTTTGGATTAGATGGAGAAGTTGATCGGTTAAGGCGTGACAAGCAGGTTCTAATGGTGGAGCTGGTGAAACTTAGACAACAACAGCAGAACACGAGAAATTGTCTTCAAGCAATGGAAGGAAGGATTAAGAAGACCGAGCAGAAGCAGCAACAGATGATGAACTTCTTAGCAAGAGCAGTGCAGAATCCCAACTTCATGCAACAATTGGttcaacaaaaggaaataaggAAAGAGCTGGAGGAAGCTTTCTCCAAGAAGAGAAGACGACCAATTGATCAAGGACCAAGTAATAATGTTGAAGTAGAGGAATTAGGCCATAATCAAGATCAATGCTCAGCTTTTGTGAAACATGAACCGCAGGAATACACTGACATATCAGAGTTTGAAGTTCCCGACCTGGACCTTGCTGTGAACATGGAGGGGTCACAAAGTGGGAACCAACGTCATCTAGAGGaggaatgcaaagaaaaagtagaaattGGAAGTAGAGATAAAGGCATTGACGAAGTATTTTGGGAAGATTTATTGAATGAAGGAATTGAAGAAGACATACTAGGTGTGGAAGAAGACGAGGAAGATATAGATGTTTTGGCTGAGCAACTTGGTTATTTGGCCTCCAGTCCTAAATA 1079 0.4152 MNPYRSAKEFRGSSSSFSGEQHHMLPPQPMQGLHETGPPPFLTKTYDIVEDISTNHIISWSRGNNSFVVWDPQAFSLSLLPRYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQRHLLKNIRRRKALQTQCSQQTLDPCVEVGRFGLDGEVDRLRRDKQVLMVELVKLRQQQQNTRNCLQAMEGRIKKTEQKQQQMMNFLARAVQNPNFMQQLVQQKEIRKELEEAFSKKRRRPIDQGPSNNVEVEELGHNQDQCSAFVKHEPQEYTDISEFEVPDLDLAVNMEGSQSGNQRHLEEECKEKVEIGSRDKGIDEVFWEDLLNEGIEEDILGVEEDEEDIDVLAEQLGYLASSPK 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01783 359 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 9 348 IPR027725 -
Bva10g01783 359 Gene3D - 33 131 IPR036388 -
Bva10g01783 359 MobiDBLite consensus disorder prediction 1 37 - -
Bva10g01783 359 MobiDBLite consensus disorder prediction 7 22 - -
Bva10g01783 359 Pfam HSF-type DNA-binding 41 130 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bva10g01783 359 ProSitePatterns HSF-type DNA-binding domain signature. 80 104 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bva10g01783 359 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-6B 9 348 - -
Bva10g01783 359 Coils Coil 219 239 - -
Bva10g01783 359 Coils Coil 157 177 - -
Bva10g01783 359 SUPERFAMILY "Winged helix" DNA-binding domain 37 130 IPR036390 -
Bva10g01783 359 SMART hsfneu3 37 130 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bva10g01783 359 PRINTS Heat shock factor (HSF) domain signature 79 91 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bva10g01783 359 PRINTS Heat shock factor (HSF) domain signature 92 104 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bva10g01783 359 PRINTS Heat shock factor (HSF) domain signature 41 64 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01783 Bva-Chr10 11831159 11833441 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01783 27 357 HSF AT3G22830 59.280 1.08e-137 396
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Bva10g01783 HSF_DNA-bind 2.4e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01783 K09419 - qsu:112016413 479.944
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g01783 10 11831159 11833441 Bva10g01783 10 11831159 11833441 ECH