Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01781 ATGAACGCCGGCACCGCGATTTTCCGCTCCATTCTCGACAAACCCCTCAAGCAGCTCACCGAGGATGACATTTCGCAGCTTACCCGCGAAGACTGTCGCAAATTCCTCAAAGAAAAAGGGATGCGTCGGCCTTCGTGGAACAAATCTCAGGCGATCGAGCAAGTTATTTCACTTAAGGCTTTGCTTGAACCCAATGACGATGATTCCGACGCTGGAACTGTGAGAAAGATTACCTTCGTTCCCCCGCGTGAAGATGCCACACCAggGAATTTGAAGGGGGCTGATTCCGCTATGGTGCCTGGAGCTGATGTTGCAGTTTCGGCACCAGATGAAGAGCCAGTTTTGCAGACCAGCGAAGAGCTTCAGAAATCTGGGTCATCTGGGGAAAAAGCAAGCGGTGCTGAAACCAATGAGAAGGCCGTCAGTCCCAGAGGGTGTGAAACTAGTCAGTCAGTTGGGCAAATGACAATTTTCTACTGTGGTAAGGTGAATGTTTATGATGAAGTGCCGCCTGATAAGgcaagaaaaattatgcAGCTCGCAGCAAGTCCAACCTATTTACCTCCTGATGATTTATTCAATAGAACTTCAACAGTTTGGCCTTATCCGTGCCACTTACAGATGGATAAAGATGCTCTTGTCCCATTTGATACAACAATCCCTCAGGTTGCTATAGCAGATAAGATGATAGAGTATCCACTGCAGTATAGGGAGAAAGGGAGCAGTGCTCGTGATGTTGACATGGAAGGTCAAGCAAGCAGGAAAGTTTCACTGCAACGATACCTTGAAAAGCGAAAAGACAGGGAAAGATTAAAGaccaagaaaaatagagtAGGAACTTCATCTAACTTTGAAATGGACTTGAACCACCAACTGAAGGCTCAGGCCTCAAATGGGAATTCAAGTCGTAGCAGCACGAGCTCTCCACCACAGCCTAGACTGCCCCAAGCTTCTGGTGGCTCATCTGACAACCAGCTAAAGATTGCCCTTCCTTTAGATCTCAACGACAAAGATGTTGAAGAATGCTA 1028 0.4591 MNAGTAIFRSILDKPLKQLTEDDISQLTREDCRKFLKEKGMRRPSWNKSQAIEQVISLKALLEPNDDDSDAGTVRKITFVPPREDATPGNLKGADSAMVPGADVAVSAPDEEPVLQTSEELQKSGSSGEKASGAETNEKAVSPRGCETSQSVGQMTIFYCGKVNVYDEVPPDKARKIMQLAASPTYLPPDDLFNRTSTVWPYPCHLQMDKDALVPFDTTIPQVAIADKMIEYPLQYREKGSSARDVDMEGQASRKVSLQRYLEKRKDRERLKTKKNRVGTSSNFEMDLNHQLKAQASNGNSSRSSTSSPPQPRLPQASGGSSDNQLKIALPLDLNDKDVEEC 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01781 342 Pfam tify domain 151 182 IPR010399 -
Bva10g01781 342 MobiDBLite consensus disorder prediction 118 133 - -
Bva10g01781 342 MobiDBLite consensus disorder prediction 277 325 - -
Bva10g01781 342 Pfam Jas motif 251 273 IPR018467 -
Bva10g01781 342 PANTHER PROTEIN TIFY 4B-LIKE ISOFORM X1 4 329 - -
Bva10g01781 342 MobiDBLite consensus disorder prediction 109 147 - -
Bva10g01781 342 ProSiteProfiles Tify domain profile. 148 183 IPR010399 -
Bva10g01781 342 MobiDBLite consensus disorder prediction 266 342 - -
Bva10g01781 342 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 4 329 IPR040390 -
Bva10g01781 342 SMART tify_2 148 183 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01781 Bva-Chr10 11819307 11823983 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01781 1 297 Tify Gene Family AT4G14720 48.860 2.88e-75 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Bva10g01781 tify 4.1e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01781 - - gmx:100808970 398.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g01781 10 11819307 11823983 Bva10g01781 10 11819307 11823983 ECH