Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01777 ATGGGGAAGACTAGCAAATGGCTAAAGAGCCTCTTGACTGGCAAGAAAGACAAGGAAAAATCTGCAGCAAATCAGAATCAGATCAATTCTTCAAATGGCATTGAGAATCCAACTACTCCAATCTCCACAAccccaaaagagaaaaggagatgGAGTTTTCGGAGATCATCGGCCACAGCAACAATTCAGAAGGAATTGAATTTTACAGATCAATCGAGTGTCACCACTTCAGTGACACTGCAACCTGCAACTGATGCTGAGAATGAGCAGAGGAAGCATGCCATGGCCGTGGCAGCTGCCACAGCAGCTGCTGCTGAAGCTGCGGTGGCTGCAGCACAGGCTGCAGCTGCTGTGATCCGCTTAACTGCTGCTTCCAATAACACAGGAACAGCTAGAAGCATAGAAGAGGCTGCTGCCATTAAAATTCAATCCGTTTTTCGTGCTCATTTGGCAAGAAAGGCATTGCATGCACTTAGAGGAGTGGTGAAGTTGCAGGCACTAGTAAGAGGTCACTTGGTGAGAAAACAGGCCACTGCTACATTAAGGTGCATGCAGGCTTTGGTGACAGCACAATCTAGAGCTCGTGCTCAGAGGATCCGAATGGTGTCAGCAGATGGAAAACCTAATCATAGGCAATCACCTCAGAGGAAAACCACATTGGAAAACTCGAGGCACATGTATAACGAAATGGATAAAGGGTTAGAGGAGAACATCAAGATTGTGGAGATGGATGTTTGTGAATCAAGAGGCATCTCAAGAAGCAGAAACAGCAGCTTTAAGCACTTACAACATGAAGGGTCAGAGCACAGATTCTCCACATATTattcaaaggaagaaaactaCAAGGTCTCACCAGCTCCATCAGCATTCAGAGAGTTAAGTCCAAGAGCATGCAGTGGCCATTTTGAGGACTGTTCCTTCAGCACAGCTCAAAACAGCCCCCATTACTATTCTGCGGTGTCCAGACCTGATGAGTCAAAGCTTCCTTTCAGTTTCCCTCGGCCGGCTTACGCAGAATCCATGTCGTATGACTATCCGTTGTACCCAAATTACATGGCTAACACAGAATCCTCAAGGGCCAAAGTTAGATCACATAGTGCACCAAAGCAAAGGCCAGATTCATATGAGAGGCAACCGAGCCGGCGAAGAGCTTCGGTGGAAGGAAGAAATGTGCCAAAACCAGTGCGGATGCAGAGGTCATCTTCTCATGTTGGTGTCACTGCCCAGAACTACCAATATCCATGGTCAATCAAGCTAGATAGGTCCACAGTTTCACTCAAAGACAGTGAGTGTGGCTCAACAAGTACAGTCCTCACTAATACTAATTACTGCAGATCTCTTGTGGCATATGATCCTCATGGAGATAGATACTG 1373 0.453 MGKTSKWLKSLLTGKKDKEKSAANQNQINSSNGIENPTTPISTTPKEKRRWSFRRSSATATIQKELNFTDQSSVTTSVTLQPATDAENEQRKHAMAVAAATAAAAEAAVAAAQAAAAVIRLTAASNNTGTARSIEEAAAIKIQSVFRAHLARKALHALRGVVKLQALVRGHLVRKQATATLRCMQALVTAQSRARAQRIRMVSADGKPNHRQSPQRKTTLENSRHMYNEMDKGLEENIKIVEMDVCESRGISRSRNSSFKHLQHEGSEHRFSTYYSKEENYKVSPAPSAFRELSPRACSGHFEDCSFSTAQNSPHYYSAVSRPDESKLPFSFPRPAYAESMSYDYPLYPNYMANTESSRAKVRSHSAPKQRPDSYERQPSRRRASVEGRNVPKPVRMQRSSSHVGVTAQNYQYPWSIKLDRSTVSLKDSECGSTSTVLTNTNYCRSLVAYDPHGDRY 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01777 457 SMART iq_5 157 178 IPR000048 GO:0005515
Bva10g01777 457 SMART iq_5 134 156 IPR000048 GO:0005515
Bva10g01777 457 MobiDBLite consensus disorder prediction 23 46 - -
Bva10g01777 457 Gene3D - 134 187 - -
Bva10g01777 457 MobiDBLite consensus disorder prediction 1 52 - -
Bva10g01777 457 Pfam IQ calmodulin-binding motif 137 155 IPR000048 GO:0005515
Bva10g01777 457 Pfam IQ calmodulin-binding motif 159 176 IPR000048 GO:0005515
Bva10g01777 457 ProSiteProfiles IQ motif profile. 159 186 IPR000048 GO:0005515
Bva10g01777 457 Pfam Protein of unknown function (DUF4005) 311 390 IPR025064 -
Bva10g01777 457 PANTHER IQ-DOMAIN 5-RELATED 1 434 - -
Bva10g01777 457 MobiDBLite consensus disorder prediction 362 389 - -
Bva10g01777 457 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 434 - -
Bva10g01777 457 ProSiteProfiles IQ motif profile. 135 163 IPR000048 GO:0005515
Bva10g01777 457 MobiDBLite consensus disorder prediction 356 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01777 Bva-Chr10 11780321 11782953 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01777 1 445 IQD Protein Family AT4G14750 46.822 3.26e-106 321
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01777 - - tcc:18603043 613.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g01777 10 11780321 11782953 Bva10g01777 10 11780321 11782953 ECH