Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bva10g01776 | ATGGCGGAAACTAAGAGAGGGTCGACTGCTACTGCTTCATCAGAAGGTGGTGCTGGTGAAGGGGTATCTCTAAAAGATCAGGgtaatgaatttttcaaagcaGGCAAGTATCTAAAAGCAGCTGCGCTTTATACTCAAGCCATCAAGCAAGACCCTTCAAATCCCACTCTTTATAGTAATCGTGCTGCTGCATTGCTGCAATTGGATAAGCTTAATAAAGCACTTGATGATGCTGATatgacaattaaattaaagccCCAATGGGAAAAGGGGCACTTCAGAAAGGGATGCATATTGGAGGCAATGAAACGATATGATGATGCCTTGGCTGCCTTTCAGGTGGCTTTGCAGTACAACCCACAAAGTCAAGAAGTAgctaaaaagataaagaagatAAACCAACTGATGAAAGATAGAAAGAGAGCTGAAGAAGTGGAAATCATTAGATCTAATATTGACATGGCGAAGCATTTAGATATTCTGGAACCTGAACTgTCTGGGAAGTATGGATCCGAAGAATGCGAGAAAGAGATATTCTCTTTCCTTGTTGAAACCATGGAGACAGCTGTAAAATCTTGGCATGAAACTTCTACAGTGGATGCCAGAGTCTACTTCCTTCTTGATAAGGAAAAGACGCAGACTGATAAGTATGCTCCGATTGTAAATATAGATAAGGCCTTTGAATCGCCACACACACATGGCAACtgcttttcatttattaggCAGTATGCTGAGGAATCTTTCTCCAAAGCTGCCTGCTTAGTGGCTCCCAAAAGCATAATCTCTTATCCACAGGTCTGGAAAGGCCAAGGATCAAGGAAGTGGAAGCATGGGCAGAATGATGGTTTCTTTGTTCAATTTGAGTCTCCTTCCGTGCGAAAGCTGTGGTTTATTCCCAGTTCTAATGAAATGGGACGAACATTATGCAGGAATCCAGAGGTGTTGGACATTGGTTCTCACGAAATTTTTCCTCGAATATTCAAAGAAAAGCTATCCAGTTCTTA | 1004 | 0.3944 | MAETKRGSTATASSEGGAGEGVSLKDQGNEFFKAGKYLKAAALYTQAIKQDPSNPTLYSNRAAALLQLDKLNKALDDADMTIKLKPQWEKGHFRKGCILEAMKRYDDALAAFQVALQYNPQSQEVAKKIKKINQLMKDRKRAEEVEIIRSNIDMAKHLDILEPELSGKYGSEECEKEIFSFLVETMETAVKSWHETSTVDARVYFLLDKEKTQTDKYAPIVNIDKAFESPHTHGNCFSFIRQYAEESFSKAACLVAPKSIISYPQVWKGQGSRKWKHGQNDGFFVQFESPSVRKLWFIPSSNEMGRTLCRNPEVLDIGSHEIFPRIFKEKLSSS | 334 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bva10g01776 | 334 | SUPERFAMILY | TPR-like | 23 | 132 | IPR011990 | GO:0005515 | |
Bva10g01776 | 334 | Pfam | TPR repeat | 28 | 68 | - | - | |
Bva10g01776 | 334 | ProSiteProfiles | TPR repeat profile. | 21 | 54 | IPR019734 | GO:0005515 | |
Bva10g01776 | 334 | ProSiteProfiles | TPR repeat profile. | 89 | 122 | IPR019734 | GO:0005515 | |
Bva10g01776 | 334 | Gene3D | Tetratricopeptide repeat domain | 21 | 134 | IPR011990 | GO:0005515 | |
Bva10g01776 | 334 | Pfam | Tetratricopeptide repeat | 90 | 121 | IPR013105 | - | |
Bva10g01776 | 334 | MobiDBLite | consensus disorder prediction | 1 | 16 | - | - | |
Bva10g01776 | 334 | PANTHER | STRESS-INDUCED-PHOSPHOPROTEIN 1 | 23 | 330 | - | - | |
Bva10g01776 | 334 | SMART | tpr_5 | 55 | 88 | IPR019734 | GO:0005515 | |
Bva10g01776 | 334 | SMART | tpr_5 | 89 | 122 | IPR019734 | GO:0005515 | |
Bva10g01776 | 334 | SMART | tpr_5 | 21 | 54 | IPR019734 | GO:0005515 | |
Bva10g01776 | 334 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
Bva10g01776 | 334 | PANTHER | TPR REPEAT CONTAINING PROTEIN | 23 | 330 | IPR045248 | GO:0006457|GO:0030544|GO:0051879 | |
Bva10g01776 | 334 | Coils | Coil | 125 | 145 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bva10g01776 | Bva-Chr10 | 11774539 | 11779968 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bva10g01776 | 24 | 132 | U-box Gene Family | AT3G07370 | 27.523 | 2.42e-06 | 46.6 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bva10g01776 | - | - | gmx:100790717 | 544.273 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Bva10g01776 | 10 | 11774539 | 11779968 | Bva10g01776 | 10 | 11774539 | 11779968 | ECH |