Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01775 ATGGCCTCTCAATCCTCAAAATTGCGACACCCTTATCTATCTCTTCCATCCCATTTCTGCGTCACTATCCTGTTTGTCATTCTCTTCTCCATCAAACCCTCGGAGCAATCTGAAACTTCCCAAATCCAATCAAACCCAAGGCTCCAAAAAGCTTACATAGCCCTCCAAGCATGGAAGCACACTTTCACTTCAGACCCCAATAACTTCACCTCCAATTGGTGCGGTTACCACGTCTGCAACTACACCGGAATCTACTGTGCACCCGCTCCAGACGATCCCCACATCTATACCGTCGCCGGAATAGACCTCAACCATGCCAACATAGCTGGTTCTTTACCGGAAGAGCTTGGCCTCTTAACTGACCTCGCCATTTTCCACATAAACTCCAACCGTTTCTGCGGTTCCATCCCCAAAAGCTTTCGcaatcttcatcttcttcacgAGCTTGATATAAGCAATAACAAATTCTCAGGGCCGTTCCCCTCTGTTCTTCTCTGTCTTCCATCgttgaaattcttggataTCAGGTTCAATGAATTCAACGGTGATGTTCCTTCGAGGCTTTTCGATCTTAAGCTCGATGCCCTCTTCATTAACAACAAcaagtttcaattttccttGCCGGACAATTTTGGGAACTCCACGGTTTCTGTTGTGGTGTTTGCCAATAATAACCTCAAAGGTTGTCTTCCTTCGAGTTTGGGGAAAATGAAGGATACCCTTAATGAGATTATAATCACGAATAGTGGGTTGAAGGGTTGTTTGCCGCAGGAGATAGGGAAATTGGAGAAAGTTACGGTTTTCGATGTGAGTTCTAACGAGTTGGTTGGTCCGTTGCCGGAGTCTGTAGGAAAAATGAAGAGCTTGGAGCAGTTGAATGTGGCGCATAACAAGTTTTCAGGGGTGATTCCGGAGAGTATATGCTCGTTGCCGAGGTTGCAGAACTTCACCTATTCGTTTAACTACTTCTGTGGGGAGTCGCCGGTGTGTCTCAAGTTGCCGGACAAAGATGACCGGAAGAATTGTATTCCGTTTAGGCCATCGCAGAGGTCACATGAGGAATGTGCTGCTTTTTATGCACGCCCTGTTGATTGTAATGCCTTTGGCTGCCTACGGAGTACAAGTCCACCTCCTCCCCCTCCCCCACCACCGCCACCACCTCCTCCCCCGCCCCCTCCCCCACCACCTCCTcccccacccccacccccACCCCACCCCACCCCCACCGCCACCACCGCCTCCTTCCTCTTGTCCTCCGCCGGAGATATATACAGAGAGCCATCAATTAGAATTTA 1295 0.4641 MASQSSKLRHPYLSLPSHFCVTILFVILFSIKPSEQSETSQIQSNPRLQKAYIALQAWKHTFTSDPNNFTSNWCGYHVCNYTGIYCAPAPDDPHIYTVAGIDLNHANIAGSLPEELGLLTDLAIFHINSNRFCGSIPKSFRNLHLLHELDISNNKFSGPFPSVLLCLPSLKFLDIRFNEFNGDVPSRLFDLKLDALFINNNKFQFSLPDNFGNSTVSVVVFANNNLKGCLPSSLGKMKDTLNEIIITNSGLKGCLPQEIGKLEKVTVFDVSSNELVGPLPESVGKMKSLEQLNVAHNKFSGVIPESICSLPRLQNFTYSFNYFCGESPVCLKLPDKDDRKNCIPFRPSQRSHEECAAFYARPVDCNAFGCLRSTSPPPPPPPPPPPPPPPPPPPPPPPPPPPPPHPTPTATTASFLLSSAGDIYREPSIRI 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01775 431 Pfam Leucine rich repeat N-terminal domain 54 86 IPR013210 -
Bva10g01775 431 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 6 29 382 - -
Bva10g01775 431 MobiDBLite consensus disorder prediction 375 409 - -
Bva10g01775 431 SUPERFAMILY L domain-like 52 332 - -
Bva10g01775 431 Gene3D Ribonuclease Inhibitor 215 342 IPR032675 -
Bva10g01775 431 MobiDBLite consensus disorder prediction 375 412 - -
Bva10g01775 431 Gene3D Ribonuclease Inhibitor 49 214 IPR032675 -
Bva10g01775 431 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 29 382 - -
Bva10g01775 431 Pfam Leucine rich repeat 122 179 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01775 Bva-Chr10 11768680 11770042 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01775 44 370 Leucine-rich Repeat extension Gene Families AT3G22800 71.646 6.42e-170 483
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01775 - - gmx:100818195 566.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g01775 10 11768680 11770042 Bva10g01775 10 11768680 11770042 ECH