Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01772 ATGGACACCCCAGAGAGGAACCAGATCGGCACTTCCATCTCTAAGTTCGAGGATTCCCCTGTATTCAACTATATCAATAGTCTTTCTCCTATAAAGCCTGTTAAGTCTGTTCACATTACTCAGACATTCAACACACTTAGTTTTCCATCCCCTCCATCTGTTTTCACATCACCCCATGTCAATGCTCACAGGGAGTCTAGATTTGTCCGGAGGCATAACCATTTGGATGCATCAAAGACTAAAGTTGTGTCTGAAGATGGAAACAAAATCTCTTCAAGCGAAGAGGACTCAACTCATGCATATAGTAATTCAGAGGAAAAACAGGGAAATAGTGATGAAAGAATTTCTGTAGGAGATGCTTCAAGTGATCCATCTAATGAACAAGCACAGTTTATAATTGAGCTACCACAAACCTTAAAATATGATTGTGGTAGCCCTAGTTATGATCATCCGCCTTGCAGCAATGAGACAAGTTGTCTAGTGGAATTGCCAGGCACATCAGAGGTTGTGAATGTTCATGAAACCAGTAAAATTGATTCCACGGAGGATGAAGCATCTTTAGAAGGAATGTGTCAGATTGGGCCAAAAACTGAAGGCACAGAGTGTGATTGGGTGAGTTTGATGTCTGATGCTGCTGATCTGTTGATTTTTAATTCCCCCAATGAAACAGAAGCTTTTAGGGGCGTAATGCAGAAATCTTTGGACCACACAGTACAGTTTTGTAATGCCATGTCTCAGCTACCAGAAACTAGCACCAATAATGGCAGGAGAGTGCACATTGTTAATCCTGATGCTTCTAGTTCAGACCACGATATTGAAGAGATTCCTTATCAACCAGGCATAGACAAAGAAACGGATCAGACGGGGGAAAATCTCGCCAATGTTGCTGTCATGCCTAGCAATATGAATGACAAAATGGATAATGAGCTTCTTTGTGTAACATACCGTGGTTTGCGGAGGCGCTGCCTAGACTTTGAGATGGCTGCAGCTCGAAGGAAGAACTCAGATGATGGTTCAAATACTGGTTCCAGTACATCTCAATCTGAAGAGAGGTATGCTGCTAATAATAAGCAGCTACTTCCAACAAAACGCAGTGGTGATTCACAGAGGTGCATTTTACCTGGAATTGGTTTCCACCTAAATGCTCTTGCAACTCTAAAAGATTGCAAAAGCGTCAAAACTGAAAATTTGTCTTCTGGAAGACGATTCAGTCTGCCCAGCTCCGCTTCTTCCTTACAACTCTCTACAGGCCAAGAACGTCCTCCCCTCTCTTCAATATCAGCATGTGCTGAAAGAGGTTTGGATGCACCCGACCCAAACAATGGTGTCCTGCAGCCTGCTGAAGATTCTTCAGAGGTGTCTGCATATGTGGTCAACGACGATTTCAATCAGAATAgccctaaaaagaaaagGCGTAAGTTGGAGCCAGCTGCAGAAGGCGAGTCCTGCAAGCGATGTAATTGTAAGAAATCAAAGTGCTTGAAACTTTATTGTGAGTGCTTTGCTGCTGGTGTCTACTGCATAGAGCCTTGTTCCTGTCAGGATTGCTTCAACAAGCCTATTCATGAGGATACTGTCCTTGCAACCCGCAAGCAGATTGAGTCTCGCAACCCTCTTGCATTTGCTCCTAAAGTCATCAGAACTTCTGATTCTGTACCTGAAGAGGACCCCAACAAAACTCCAGCTTCAGCACGACATAAAAGAGGATGCAACTGCAAGAAATCAAACTGCCTAAAGAAATATTGTGAATGTTATCAGGGTGGTGTTGGTTGCTCCATTAGCTGTAGGTGCGAAGGATGTAAAAATGCGTACGGTAGAAAGGATGgTTCTGCCCCAATTGAAGCTGAACACGAAGAAGAAACTGAAGCAACTGAAAAGGGTGAGATGGAAAGAGCATCACAGAAAACTGTTACTCAAAATGAGGAAGACCATCCTGACTCTGCTCTTCCCACAACACCATTGAGGCTTTCCAGACCATTAATTCCATTGCCCTTTTCATCAAAGGGAAAGCCTCCTCGTTCTTCCTTCATCACTACCATATCTGCTTCTAGATTGTATGGCAGTCAGAAACTCGGGAGGCCCAATATTATTCGGTCTCAATCCAACTATGAAAAACCTTTTCAAAGTGTTGCAGATGATGAAATGCCAGAGGTTCTCCGAGGCGACGGATCTCCTATCACTTGCATGAAGACTTCTTCTCCCAATGGCAAGAGGATCTCATCTCCCAACTGTGACATAGGATCATCTCCAGCTCGCAGAAGTGGGAGGAAGTTAATATTACAATCCATcccttcatttccttctctcaCCCCTCACCATTG 2321 0.4296 MDTPERNQIGTSISKFEDSPVFNYINSLSPIKPVKSVHITQTFNTLSFPSPPSVFTSPHVNAHRESRFVRRHNHLDASKTKVVSEDGNKISSSEEDSTHAYSNSEEKQGNSDERISVGDASSDPSNEQAQFIIELPQTLKYDCGSPSYDHPPCSNETSCLVELPGTSEVVNVHETSKIDSTEDEASLEGMCQIGPKTEGTECDWVSLMSDAADLLIFNSPNETEAFRGVMQKSLDHTVQFCNAMSQLPETSTNNGRRVHIVNPDASSSDHDIEEIPYQPGIDKETDQTGENLANVAVMPSNMNDKMDNELLCVTYRGLRRRCLDFEMAAARRKNSDDGSNTGSSTSQSEERYAANNKQLLPTKRSGDSQRCILPGIGFHLNALATLKDCKSVKTENLSSGRRFSLPSSASSLQLSTGQERPPLSSISACAERGLDAPDPNNGVLQPAEDSSEVSAYVVNDDFNQNSPKKKRRKLEPAAEGESCKRCNCKKSKCLKLYCECFAAGVYCIEPCSCQDCFNKPIHEDTVLATRKQIESRNPLAFAPKVIRTSDSVPEEDPNKTPASARHKRGCNCKKSNCLKKYCECYQGGVGCSISCRCEGCKNAYGRKDGSAPIEAEHEEETEATEKGEMERASQKTVTQNEEDHPDSALPTTPLRLSRPLIPLPFSSKGKPPRSSFITTISASRLYGSQKLGRPNIIRSQSNYEKPFQSVADDEMPEVLRGDGSPITCMKTSSPNGKRISSPNCDIGSSPARRSGRKLILQSIPSFPSLTPHH 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01772 773 MobiDBLite consensus disorder prediction 68 126 - -
Bva10g01772 773 MobiDBLite consensus disorder prediction 608 674 - -
Bva10g01772 773 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 1 773 IPR044522 GO:0003700
Bva10g01772 773 MobiDBLite consensus disorder prediction 400 423 - -
Bva10g01772 773 MobiDBLite consensus disorder prediction 610 642 - -
Bva10g01772 773 MobiDBLite consensus disorder prediction 726 748 - -
Bva10g01772 773 MobiDBLite consensus disorder prediction 69 113 - -
Bva10g01772 773 MobiDBLite consensus disorder prediction 717 773 - -
Bva10g01772 773 MobiDBLite consensus disorder prediction 334 365 - -
Bva10g01772 773 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 1 773 - -
Bva10g01772 773 SMART CXC_2 565 606 IPR033467 -
Bva10g01772 773 SMART CXC_2 481 522 IPR033467 -
Bva10g01772 773 ProSiteProfiles CRC domain profile. 482 605 IPR005172 -
Bva10g01772 773 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 484 519 IPR005172 -
Bva10g01772 773 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 568 603 IPR005172 -
Bva10g01772 773 MobiDBLite consensus disorder prediction 331 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01772 Bva-Chr10 11743536 11748408 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01772 1 773 CPP Transcription Factor Family AT3G22780 43.019 7.60e-169 501
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Bva10g01772 TCR 2.7e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01772 - - gmx:100804447 948.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g01772 10 11743536 11748408 Bva10g01772 10 11743536 11748408 ECH