Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01758 ATGAGTTCTGTCAGATACAAGTCAGATGAAGAACGCTCTGTCATAGGAGAGAAAGCTGACATTGGATTTCTGGATTTTGAGGAAGAGAAATCTCATTGTAGTTATGTCCCTGATGATGAGAGTCCTGTTGTCATTTCTGTCCCCTTTCCGTTTGTTAAGGGGTCGCCTCAATCAGTAATTGTTGGAGATACTGCCGTGGATTCAATTACCATCAAAAACACTACTAAAGAATCTGTGGAGCTGTGGGCTGTCCgtatttttatctcaaatccTGAGAATTCTTTCTCACTCTCTCTGATGGAACCACCACTGGGAAATTCAACCACAGATAGTGGTAGAGGCTTTGTAGAATCGGACTCTTTGGAAGATAGGGTTCTTCAGCCTAATGAGACTTTGACAGTATGGTTGTCTTGCAAAACAAAGAACATGGGCTTGCACTCATCAATTGTGCACTTTGATGTAGGGGATGAAAGAATAGAAAGGGTAGTTTTTCTCTTAGTTGAAGATATGATCTCCCAGTCCTTGGCTCCTAAGCAGCCTTATTcaaaaggcaaaagaaaagaaaaatatgtcgTGGATACTTTTGTTTCAGGCTCACGTCCTAGGAGAAAGACATATCGAAGTTACAAAAATAGACTTCCGCGATATGACATCCCAAAGGACATCAGAGACTTGCTTGAAAGGAATGAGATCCCTCCTTCTATTGAACAAGGTCTCACAAGAAAGAACTATTCCTCTTACTTCAAAATGTTAATAATGATGGAAGAAATACAATTGGAGGATGACATGAGGAGTTATGACATGGAGTGCATAACCATGAAGAAGAGGCCTAATCAACTTCTATCCATGGTGGTTCCAGGGCTTGCTGAGAGAAGGCCATCGCTGGTCCATGGGGATTTTATCATTGCCAGGCTAGCCTCTGAACGCGCTCAAAATGCTACTAATTTTCAGGGATTTGTCCACCGTGTTGAAGCTGATGAAATATTTCTGAAGTTTGATCCTCAGTTTCACTTGCATCACAGTGATGCGAATCTCTATAATGTTCACTTCACatataatagaattaataTGAGGAGGCTGTATCAGGCAGCTGAGGCAGCGGAAAAGTTAGGAAGAGAATTCCTTTTTCCATCTGAATCATCCAGGAGGCACATTAAAACCACACCTCTGGTACCTGTATCTGGTAATCTTAATGAGGAGCAGATATGTTCTGTCAAGATGATTCTTGGTTGCAAAGGCGCACCACCTTACGTGATTCATGGACCTCCTGGTACTGGAAAGACTAGTACAGTTGTAGAAGCAGTACTCCAGCTCTACAGAAACCACCCGGATGCTCGTATTCTTGTTTGTGCACCCTCAAATAGTGCGGCAGATTACATTCTGGAGAAACTCCTTCACCAAAATGGTGTTAAATGTcgagaaaatgaaatattcagGCTCAATGCATCTACCAGGCCTTATGAAGAGATCAAGCCTGAACTGATGCACTTCTGCTTCTTTGATGAATTCATATTCAAGTGTCCTCCATTCAATGCGCTCATGCATCATAGGATCATAATATCAACTTATATGAGTGCTTGTCTTCTTTATGCAGAAGATGTTGTCCAGGGTCACTTCTCTCATATATTCTTGGATGAGGCTGGCCAAGCTTCAGAACCAGAAACAATGATCCCTATTTCACATCTCTGCACAAGGGAGACTGTTGTTGTTCTAGCTGGAGACCCAATGCAGTTAGGTCCAGTAATATATTCACATCAGGCAGAAACTTTTGGATTGGGGAAATCATACTTGGAAAGACTGTTTGAATGCGAATTATACACCAAAGGAGATGAAAACTATATAactaaattggttaaaaactACCGATGTCACCCAGCAATTTTACATCTCCCCTCAATGCTGTTCTATGATGGAGAATTGATTGCATCTAGAGATACCTCTTCCTTCGTGATGACTGCAGACTTTCTTCCTAATAAAGAGTTCCctgttcttttctttggcATCCAAGGATGTGATGAAAGAGAAGGGAACAACCCATCATGGTTTAACAGAATTGAAGTAAGTAAGGTTGTTGAAGTAGTCAAGAGGCTGACAGCTTTTGGGAACATAACAGAGCAAGATATAGGTATAATAGCACCTTATCGACAGCaagttcttaaaataaaaaatatacttgaAAGTCTAGATATGTCCAATATCAAAGTTGGTAGTGTAGAGCAATTCCAGGGACAGGAGAAGCAGGTCATTATCATATCAACTGTTCGCTCAACCATCAAACACAATGAATTTGACAGAGTTCACTGTCTAGGATTTTTGAGCAATCATAGAAGGTTTAATGTGGCTGTTACTCGTGCAATATCTATGCTGGTTGTAATTGGGAATCCACATATTATCTGTCAGGACTACTATTGGAACAAGCTCCTGTGGCATTGTGTGGACAACTCATCTTATCAGGGTTGTCCTCTTCCTGAAAGGATCGAGGAGGCTGAAGAGGAGTATTATGATGAGgataatcaagaaaatgagTTCACTGCTTACAATGGGGAATGGGGTCAAGACAATGTGGAATGGGGTCAAGATGCTTCGCAGCCAGAGTTCTCTAATCCTGCTAAGGATGAAGATGAATGGTCTGAAGGTTGGAAGTA 2645 0.3947 MSSVRYKSDEERSVIGEKADIGFLDFEEEKSHCSYVPDDESPVVISVPFPFVKGSPQSVIVGDTAVDSITIKNTTKESVELWAVRIFISNPENSFSLSLMEPPLGNSTTDSGRGFVESDSLEDRVLQPNETLTVWLSCKTKNMGLHSSIVHFDVGDERIERVVFLLVEDMISQSLAPKQPYSKGKRKEKYVVDTFVSGSRPRRKTYRSYKNRLPRYDIPKDIRDLLERNEIPPSIEQGLTRKNYSSYFKMLIMMEEIQLEDDMRSYDMECITMKKRPNQLLSMVVPGLAERRPSLVHGDFIIARLASERAQNATNFQGFVHRVEADEIFLKFDPQFHLHHSDANLYNVHFTYNRINMRRLYQAAEAAEKLGREFLFPSESSRRHIKTTPLVPVSGNLNEEQICSVKMILGCKGAPPYVIHGPPGTGKTSTVVEAVLQLYRNHPDARILVCAPSNSAADYILEKLLHQNGVKCRENEIFRLNASTRPYEEIKPELMHFCFFDEFIFKCPPFNALMHHRIIISTYMSACLLYAEDVVQGHFSHIFLDEAGQASEPETMIPISHLCTRETVVVLAGDPMQLGPVIYSHQAETFGLGKSYLERLFECELYTKGDENYITKLVKNYRCHPAILHLPSMLFYDGELIASRDTSSFVMTADFLPNKEFPVLFFGIQGCDEREGNNPSWFNRIEVSKVVEVVKRLTAFGNITEQDIGIIAPYRQQVLKIKNILESLDMSNIKVGSVEQFQGQEKQVIIISTVRSTIKHNEFDRVHCLGFLSNHRRFNVAVTRAISMLVVIGNPHIICQDYYWNKLLWHCVDNSSYQGCPLPERIEEAEEEYYDEDNQENEFTAYNGEWGQDNVEWGQDASQPEFSNPAKDEDEWSEGWK 881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01758 881 MobiDBLite consensus disorder prediction 867 881 - -
Bva10g01758 881 PANTHER DNA2/NAM7 HELICASE FAMILY 7 844 IPR045055 -
Bva10g01758 881 CDD DEXXQc_Helz-like 397 622 - -
Bva10g01758 881 Gene3D - 622 821 IPR027417 -
Bva10g01758 881 Pfam AAA domain 397 490 IPR041677 GO:0004386
Bva10g01758 881 Pfam AAA domain 513 584 IPR041677 GO:0004386
Bva10g01758 881 Gene3D - 347 490 IPR027417 -
Bva10g01758 881 Gene3D - 509 607 IPR027417 -
Bva10g01758 881 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 396 810 IPR027417 -
Bva10g01758 881 Pfam AAA domain 593 795 IPR041679 -
Bva10g01758 881 CDD SF1_C_Upf1 623 811 IPR041679 -
Bva10g01758 881 Gene3D - 295 346 - -
Bva10g01758 881 PANTHER RNA HELICASE SDE3-RELATED 7 844 - -
Bva10g01758 881 MobiDBLite consensus disorder prediction 852 881 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01758 Bva-Chr10 11651813 11660123 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01758 396 553 Core DNA Replication Machinery Family AT1G08840 30.864 3.20e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01758 K18422 - gmx:100801796 1298.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g01758 10 11651813 11660123 Bva10g01758 10 11651813 11660123 ECH