Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01738 ATGGGCTTTCGTTTGCCTGGTTTCCAAAGGCGTGCAGATGTTCCCAAGGGCTATGTTGCAGTCTACATTGgggaagaaaatcaaaagaagcGATTTGTGATCCCCATATCATACTTGAACCAACTGATATTTCAAGAGCTCTTGAACCAAGCAGAACAAGAATTTGGATATGATCATCCAATGGGGGGTCTAACAATTCCTTGCAGAGAAGATGTCTTCCTTGACGTTACCTCTCGCTTGCACTGCAGACTGACGTGTAGATTAGCAGTGCATTCCTG 278 0.4173 MGFRLPGFQRRADVPKGYVAVYIGEENQKKRFVIPISYLNQLIFQELLNQAEQEFGYDHPMGGLTIPCREDVFLDVTSRLHCRLTCRLAVHS 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01738 92 Pfam Auxin responsive protein 10 79 IPR003676 GO:0009733
Bva10g01738 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 8 81 - -
Bva10g01738 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 8 81 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01738 Bva-Chr10 11552946 11553224 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01738 13 73 Calmodulin-binding Proteins AT3G43120 52.459 7.42e-17 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01738 K14488 - gmx:100527820 138.272