Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01719 ATGAATGGTGCTGCAAGTATTGAGGGAGAATACTCTGAGTTTGTGGAAGTTGATCCCTCTGGAAGATATGGAAGATACAACGAGATTCTTGGCAAAGGAGCTTCAAAGACAGTTTACAGAGCATTTGATGAGTATGAAGGGATAGAAGTAGCATGGAATCAAGTGAAGCTTTATGACTTTCTGAAGAACCCAGAAGATCTTGAGAGGTTATACTGTGAAATTCATCTTCTCAAGACTTTGAATCACAAAAACATCATGAAGTTCTATACTTCCTGGGTTGATACTGCTAATAGGCACATTAACTTTGTCACCGAGATGTTTACTTCTGGGACTCTCAGACAGTACAGGCTAAAACATAGAAGAGTTAACATCAGAGCTGTTAAGCACTGGTGCAGGCAGATTTTGGAAGGGCTACTCTATCTCCACAGCCGTAACCCTCCTGTAATCCACAGAGATCTCAAGTGTGATAACATTTTCATAAATGGTAACCAAGGGGAGGTCAAGATTGGTGATCTTGGCCTCGCTGCAATTCTCCGGAAATCCAGTGCTGCTTGCTGTGTTGGCACACCTGAGTTTATGGCTCCAGAAGTGTATGAAGAGGATTACAATGAATTAGTTGACATATACTCTTTTGGAATGTGCATCTTGGAGATGGTCACTTTTGAATATCCTTATAGTGAATGCGCTAATCCAGCTCAAATTTACAAGAAAGTTGTTTCTGGGAAGAAACCAGAATCTCTTTATAAAGTCCAGGATCCTGAAGTTAGACAGTTTGTGGAGAAATGCTTAGCAACTGTGTCCCTCAGGCTTTCTGCCAAGGAACTCCTTAAAGaccattttcttcaaattgatGATTATGGGTTTGATTTGAAACATTTGCAGTATGAAAGAGATTCTTATGAAGCAACCCCATTAATTAGACAACCCCTAAATGGATTTCATAGCAGTAGCAGCTCCTTAATTAATGGATACAGTGATTATCTTAGTGCTTATGACCATGAATCTGAGTTGGATCATCATCAAACTGATTCCAAAATAAGCGAAATCGATCTCTTTGAATGTGAAGAAGATGATAATTTGGTAGAAGTTGACACAACAatcaaaggaagaagagaagataatGGCATCTTTTTGAGGCTCAGAATAGCAGATAAGGAAGGTCGAGTTCGAAACATTTATTTCCCCTTTGATATCAAGACAGATACAGCATTAAGTGTTGCCTATGAAATGGTTGATGAGCTTGAACTAGCTCATCAAGATGTAACAAAAATAGCAGACATGATTGACAATGAAATTGCAACCTTGGAGCCAGACTGGAACAGGGGACCAAGAACAGTGAACAGCCCAGAATGCAATTGTGCAAGTTTCTGCCCCAATTGTGCTTCAAATGCTAACTTGTTTGATTATGCATCGCCAACCAAGAATCTGCAGATTCTTCCCTGTTCCAGAAATGGACGTGCTGCAGTCCACGGTCGATTCGAGGAGATTACTTACCAAGTTGAAGGTTCTGAACAATGTTCAACAGAAGGTGCACCTGCTGCATCAAGCCAATCCACCAACATCCATTACACAGATATCTGGGCTCAGAGAGATGAACCAGAATTAGGCTCAGACAATTTGAAAGACATCCATTGCGACGAATCACCGTGCGAAACCTCAAACCAATCAACCATCAATGACGATGAGAGAAGCATCACTGTGGATGATGAAAGTGACCCTAATACCAAAAACCCACTTTCCACCCATGTATCAGATGGAGCTTTATTGGATTATGAGAATGAAATCCGGCAAGAGCTAAGATGGCTCAAAGCAAAGTACCAAATGCAGCTAAGGGAGCTTAGAGACCAGCAATTAGGGGGAAAACCAAAGCTCATCAGCATAGCTCCTGAAAGTGAAAACTTACAGCACAAGAAAGATGCTGCAGCAGCTTCAATACTCTCAGTTGCAACCCAGTTGAAGACACAGAACAAGAGACCACTCCCAAGGCCTTTGGCTTTTGGGAAGCTACAAGCCATTATGACCAATAAAATGGTACAAGATATTGATGAAACAAGTGGATCCAATAGTCCTGAACAAATGGTCACAGCCCAAGATTTCTATGCATCAGGAGCTTTGCTTCCTCAATCGCTTCACCGAGCGACCTCTCTACCAGTTGATGCAATAGATTTCTA 2171 0.4072 MNGAASIEGEYSEFVEVDPSGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLKNPEDLERLYCEIHLLKTLNHKNIMKFYTSWVDTANRHINFVTEMFTSGTLRQYRLKHRRVNIRAVKHWCRQILEGLLYLHSRNPPVIHRDLKCDNIFINGNQGEVKIGDLGLAAILRKSSAACCVGTPEFMAPEVYEEDYNELVDIYSFGMCILEMVTFEYPYSECANPAQIYKKVVSGKKPESLYKVQDPEVRQFVEKCLATVSLRLSAKELLKDHFLQIDDYGFDLKHLQYERDSYEATPLIRQPLNGFHSSSSSLINGYSDYLSAYDHESELDHHQTDSKISEIDLFECEEDDNLVEVDTTIKGRREDNGIFLRLRIADKEGRVRNIYFPFDIKTDTALSVAYEMVDELELAHQDVTKIADMIDNEIATLEPDWNRGPRTVNSPECNCASFCPNCASNANLFDYASPTKNLQILPCSRNGRAAVHGRFEEITYQVEGSEQCSTEGAPAASSQSTNIHYTDIWAQRDEPELGSDNLKDIHCDESPCETSNQSTINDDERSITVDDESDPNTKNPLSTHVSDGALLDYENEIRQELRWLKAKYQMQLRELRDQQLGGKPKLISIAPESENLQHKKDAAAASILSVATQLKTQNKRPLPRPLAFGKLQAIMTNKMVQDIDETSGSNSPEQMVTAQDFYASGALLPQSLHRATSLPVDAIDF 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01719 723 Gene3D - 352 441 - -
Bva10g01719 723 CDD STKc_WNK 22 281 - -
Bva10g01719 723 SMART serkin_6 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g01719 723 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 377 432 IPR024678 GO:0004674|GO:0005524
Bva10g01719 723 Gene3D Phosphorylase Kinase; domain 1 8 105 - -
Bva10g01719 723 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK1-RELATED 1 709 - -
Bva10g01719 723 SUPERFAMILY Protein kinase-like (PK-like) 18 282 IPR011009 -
Bva10g01719 723 Coils Coil 596 616 - -
Bva10g01719 723 MobiDBLite consensus disorder prediction 537 583 - -
Bva10g01719 723 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Bva10g01719 723 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 709 - -
Bva10g01719 723 ProSiteProfiles Protein kinase domain profile. 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g01719 723 Pfam Protein kinase domain 27 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g01719 723 Gene3D Transferase(Phosphotransferase) domain 1 107 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01719 Bva-Chr10 11475882 11479271 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01719 1 507 MAP Kinase Kinase Kinase AT3G22420 57.734 0.0 597
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Bva10g01719 Pkinase 3.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01719 K08867 - gmx:100804179 1057.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g01719 10 11475882 11479271 Bva10g01719 10 11475882 11479271 ECH