Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01693 ATGTTATCTAGTCATTTCCAAAACGGAATCGAAACGGCGAAGCATGTTTGGTCGCCGATTCCGGGCTCCGAGGAATCTTCACCGTGCCTGGACGACACCCTTGGCCTCTTGAACAAGAACGACGGTAGCGGAGTTGAGAGTCTTGACTATGAAGTCATAGAAAATTATGCATATCGGGAAGAACAgGCGCGAAGAGGAAAGCTGTACGTGGGCTATTTGCTGGTGGTGAAGTGGTTCTTTGCCTTACTCATTGGCATTGGTACCGGGCTTGCTGCTGTTTTCATCAATATCTCTGTTGAAAACTTTGCCGGATGGAAGTTCTCATTGACGTTTGATATAATTCAGAAATCATATGTCGCTGGCTTTTTTGTATATGTCTTGttcaatttggttttggtATATTCCTCTGTATCTATCATCACACAATTTGCACCAGCAGCAGCTGGATCTGGTATTCCTGAAATCAAGGGTTACTTGAACGGAGTTGATGTTCATGGGATCCTTCTTTTCAGAACCTTAATTGGAAAGATTTTTGGAAGCATTGGTTCAGTGGGAAGCGGCCTTGCCTTAGGAAAAGAGGGTCCTCTTGTGCACACTGGTGCTTGTATTGCTTCTTTGCTTGGACAGGGTGGATCCACCAAGTATCATTTAAGTTCAAGGTGGCTTCAAGTATTCAAAAGTGATCGAGATCGTCGTGACCTTGTAACATGCGGGTGTGCAGCTGGAGTTGCAGCTGCATTTAGAGCTCCGGTTGGTGGTGTATTGTTTGCTTTGGAAGAGGTTACATCATGGTGGAGGAGTCAACTAATGTGGCGTGTCTTCTTCACTTCTGCTGTTGTGGCTGTTGTGGTGCGCACTGCAATGGGATGGTGCAAAAGTGGAAAGTGTGGACATTTTGGCTCGGGTGGATTCATTATATGGGATATATCAGGAGCTCAAGAGGATTATTCCTTTGTGGAGTTACTGCCAATGGCCATTATTGGTGTTATTGGAGGTCTACTGGGAGCCTTATTTAACCAGCTTACTCTTTATGTTTCTTCTTGGCGTCAAAGTCATCTTCACAAGAAAGGTAACCGAGTCAAGATTGTTGAAGCATGCCTTGTCTCTGTGATAACATCAGctatttcattttgcttaCCGCTTCTGAGAAAATGTAGTCCATGCCCTGAATCTGATCCTGATTCTGGTATTGAATGTCCACGACGTCCTGGAATGTACGGGAATTATGTAAATTTCTTTTGCAGCAAGGACAGGGAATACAATGATCTTGCCACTATTTTCTTCAATACACAGGATGATGCCATAAGGAATTTGTTCAGtgcaaaaacaataaatgagtACAGTGCTCAGAGTTTATTGACCTTTTTGGTTATGTTTTATGCTTTAGCAGTGATGACATTTGGCACTGCTGTTCCAGCTGGACAATTTGTTCCTGGGATAATGATAGGGTCAACATATGGACGTCTTGTTGGCATGtttgttgtaaaattttacAGACGGCTCAATATAGAAGAGGGAACGTATGCCCTGCTGGGAGCAGCATCTTTTCTTGGAGGTTCAATGCGGATGACAGTCTCTCTCTGTGTCATTATGGTTGAAATCACAAATAACTTGAAGCTTTTACCGCTTCTTATGCTGGTCCTCCTTATATCGAAGGCCGTTGGAGATGCTTTTAATGAGGGTCTCTATGAAGTGCAAGCACGACTGAGGGGCATTCCATTACTGGAATCAAGGCCAAAATATGAGATGCGGAATATGACAGCAAAGGAGGCTTGTGGAACTGAAAGGGTGGTTTCGTTCCCTCGTGTTGTTAAGGTTGCAGATGTGGTTTCCATTCTACGGAGCAACAAACACAATGGCTTTCCTGTGATTGATCACACGAGAACAGGCGAACCACTTGTTATTGGGTTAGTACTTCGTAGCCATTTATTGGTAATTTTGCAATCAAAGGTTGATTTCCAGCATAGTCCTTTACCCTCTGACCCCCAAGGCGGAGCCAAACCAATAAGACATGATTTTGGTGAATTTGCAAAGCCTGTTTCTAGTAAAGGATTAAGCATAGAGGATATACATCTAAGTGCAGATGACTTGGAAATGTACATAGATCTAGCCCCATTTTTGAATCCGTCTCCATATATTGTACCTGAAGATATGTCTGTGACAAAGGTGTACAATCTTTTCCGTCAACTAGGTTTGAGGCATTTGTTTGTTGTTCCGCGTCCTCCTCGCGTGCTTGGTTTAATAACAAGGAAAGATTTGTTGATTGAGGACACAGAAAATCTTAATACGGTAGAGCTCCAGTCAACTAGTGTAAGAACTAGGCATCGTAATAGAAGATTGATGACAAATAATGCAGATGCTGAGCGCCCTCTGCTAAATGGGATTCTGGGTCCAGACAACATATCTTCTGATTA 2414 0.4229 MLSSHFQNGIETAKHVWSPIPGSEESSPCLDDTLGLLNKNDGSGVESLDYEVIENYAYREEQARRGKLYVGYLLVVKWFFALLIGIGTGLAAVFINISVENFAGWKFSLTFDIIQKSYVAGFFVYVLFNLVLVYSSVSIITQFAPAAAGSGIPEIKGYLNGVDVHGILLFRTLIGKIFGSIGSVGSGLALGKEGPLVHTGACIASLLGQGGSTKYHLSSRWLQVFKSDRDRRDLVTCGCAAGVAAAFRAPVGGVLFALEEVTSWWRSQLMWRVFFTSAVVAVVVRTAMGWCKSGKCGHFGSGGFIIWDISGAQEDYSFVELLPMAIIGVIGGLLGALFNQLTLYVSSWRQSHLHKKGNRVKIVEACLVSVITSAISFCLPLLRKCSPCPESDPDSGIECPRRPGMYGNYVNFFCSKDREYNDLATIFFNTQDDAIRNLFSAKTINEYSAQSLLTFLVMFYALAVMTFGTAVPAGQFVPGIMIGSTYGRLVGMFVVKFYRRLNIEEGTYALLGAASFLGGSMRMTVSLCVIMVEITNNLKLLPLLMLVLLISKAVGDAFNEGLYEVQARLRGIPLLESRPKYEMRNMTAKEACGTERVVSFPRVVKVADVVSILRSNKHNGFPVIDHTRTGEPLVIGLVLRSHLLVILQSKVDFQHSPLPSDPQGGAKPIRHDFGEFAKPVSSKGLSIEDIHLSADDLEMYIDLAPFLNPSPYIVPEDMSVTKVYNLFRQLGLRHLFVVPRPPRVLGLITRKDLLIEDTENLNTVELQSTSVRTRHRNRRLMTNNADAERPLLNGILGPDNISSD 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01693 804 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 4 794 - -
Bva10g01693 804 Pfam Voltage gated chloride channel 136 555 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bva10g01693 804 Gene3D Clc chloride channel 71 576 - -
Bva10g01693 804 SUPERFAMILY CBS-domain pair 580 754 IPR046342 -
Bva10g01693 804 PRINTS Chloride channel signature 176 195 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bva10g01693 804 PRINTS Chloride channel signature 240 259 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bva10g01693 804 PRINTS Chloride channel signature 506 522 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bva10g01693 804 PRINTS Chloride channel signature 562 576 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bva10g01693 804 PRINTS Chloride channel signature 471 491 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bva10g01693 804 PRINTS Chloride channel signature 145 162 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bva10g01693 804 PRINTS Chloride channel signature 524 543 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bva10g01693 804 CDD CBS_pair_voltage-gated_CLC_euk_bac 597 754 - -
Bva10g01693 804 PRINTS Plant CLC chloride channel signature 423 439 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bva10g01693 804 PRINTS Plant CLC chloride channel signature 293 300 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bva10g01693 804 PRINTS Plant CLC chloride channel signature 261 269 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bva10g01693 804 PRINTS Plant CLC chloride channel signature 275 285 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bva10g01693 804 PRINTS Plant CLC chloride channel signature 51 59 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bva10g01693 804 Pfam CBS domain 708 754 IPR000644 -
Bva10g01693 804 Pfam CBS domain 596 647 IPR000644 -
Bva10g01693 804 CDD ClC_6_like 46 575 - -
Bva10g01693 804 SUPERFAMILY Clc chloride channel 55 577 IPR014743 -
Bva10g01693 804 ProSiteProfiles CBS domain profile. 707 764 IPR000644 -
Bva10g01693 804 Gene3D - 591 760 IPR046342 -
Bva10g01693 804 PANTHER CHLORIDE CHANNEL PROTEIN CLC-D 4 794 - -
Bva10g01693 804 SMART cbs_1 596 648 IPR000644 -
Bva10g01693 804 SMART cbs_1 710 758 IPR000644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01693 Bva-Chr10 11312653 11320690 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01693 1 773 Ion Channels AT5G26240 83.484 0.0 1248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01693 K05016 - gmx:100811908 1378.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g01693 10 11312653 11320690 Bva10g01693 10 11312653 11320690 ECH