Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01687 ATGGAGTTGCAGAGGCGCCAGGATCAGAGCGTCCCTGAGAGGAAAGGACAGAAGCGGAAGCTGGAGGAGGAGTACGAAGAGGAACGAGAGATCTCGGCGGCGCCACCCACCGGCGACGCCCGGGTGGCGCTGCTCGCCGAGGTTAGTGCGCAGGTTGATATCCTCGACTCTACTTTCTCGTGGAAGGAAGCCGATCGAGCCGCGGCTAAGCGCGCCACTCACGTCCTTGCCGAACTTGCTAAGAATGAGGAAGTAGTGAACGTGATTGTTGAAGGAGGTGCAATTCCGGCGTTGGTTAAGCATCTGCAAGCGCCTCCTTTGAGTGATAGTGATCGTAGTCAGAAGCCATTCGAGCACGAAGTTGAGAAAGGGAGTGCTTTCGCTCTAGGCCTTCTTGCCGTCAAGCCAGAACATCAACAACTAATAGTCGATAATGGTGCATTAAAACATCTCGTTGATCTCTTAAAGAGGCACAAGTGTTGTTCTACTTCTCGTGCTGTGAATAGTGTCATTCGTAGGGCTGCAGATGCTATCACTAATCTTGCACATGAGAACAGTAGCATTAAGACCCGTGTCAGGATGGAAGGTGGGATTCCGCCCCTTGTTGAGTTGCTTGAATTTACTGATATGAAGGTGCAAAGAGCTGCTGCTGGTGCACTAAGAACCCTGGcttttaaaaatgatgaaaataaaaatcagATTGTTGAATGCAATGCTCTACCAACACTCATTCTAATGCTTCGTTCTGAAGATGCTGCTATTCATTATGAAGCGGTTGGTGTGATTGGAAATCTGGTACACTCTTCCCctaatataaagaaagaagttcTTCTTGCTGGGGCTTTACAACCTGTCATTGGTTTGCTTAGCTCCAGCTGTTCTGAGAGCCAAAGGGAAGCTGCCTTGTTACTTGGACAGTTTGCAGCAACTGATTCAGACTGCAAGGTTCACATTGTGCAGAGAGGTGCTGTCCGTCCTCTGATAGACATGCTTCAGTCCCCTGATGTACAACTTAGAGAAATGTCTGCCTTTGCGTTAGGGAGATTAGCACAGgaCACACATAACCAAGCTGGTATTGCACACAATGGTGGCTTAGTTCCATTACTTAAACTTCTTGACTCAAAAAATGGGTCTTTGCAACATAATGCTGCTTTTGCGCTTTATGGCCTTGCAGATAATGAGGATAATGTGTCCGATTTTATTAGGGTAGGTGGTGTTCAGAGACTACAGGATGGAGAATTTATTGTTCAGGCCACAAAAGACTGCGTTGCAAAGACATTAAAAAGATTAGAGGAGAAGATTCATGGCCGTGTCCTGAACCATTTGTTATATCTTATGCGAGTTTCAGAAAAAGCTGTCCAAAGACGAGCTGCTTTAGCTCTTGCTCATCTTTGTTCTGCAGATGATCAGAGGACCATATTCATTGATAGCGGCGGCTTGGAATTGCTAATTGGGCTTCTTGGTTCTTCAAGCCCTAAGCAACAACTTGATGGTGCTGTGGCATTATGGAAGTTGGCCAACAAAGCCATGACTCTATCTCCCATAGATGCTGCTCCCCCTTCTCCTACACCGCAGGTCTATTTGGGAGAGCAGTATGTAAACAATGCTACATTGTCTGATGTTACTTTTTTAGTTGAAGGCAAACGCTTTTATGCTCACAGAATCTGCCTCCTTGCTTCATCTGATGCATTCCGAGCAATGTTTGATGGTGGTTATAGGGAGAAGGATGCTAGGGATATAGAGATTCCAAATATCAGATGGGAGGTTTTCGAGCTGATGATGAGATTCATTTATACTGGATCAGTAGATATTACTCTGGATATTGCCCAAGATCTCCTCCGAGCAGCCGATCAATATCTCTTAGAAGGACTTAAGCGACTCTGTGAGTACACTATTGCACAGGATATATCACTGGGGAATGTATCAAGTATGTATGAGCTTTCAGAAGCCTTTAATGCCATATCATTAAGACACACATGTATCCTCTTCATCTTGGAacaatttgataaattgagtGCCAGGCCAGGGCATTCTCATCTGGTTCAGCGTACAATACCAGAAATCCGCAATTACTTCGCGAAGGCACTTACAAAGGCTAACACCCATAACTTCCGGTTGTA 2120 0.4472 MELQRRQDQSVPERKGQKRKLEEEYEEEREISAAPPTGDARVALLAEVSAQVDILDSTFSWKEADRAAAKRATHVLAELAKNEEVVNVIVEGGAIPALVKHLQAPPLSDSDRSQKPFEHEVEKGSAFALGLLAVKPEHQQLIVDNGALKHLVDLLKRHKCCSTSRAVNSVIRRAADAITNLAHENSSIKTRVRMEGGIPPLVELLEFTDMKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLRSEDAAIHYEAVGVIGNLVHSSPNIKKEVLLAGALQPVIGLLSSSCSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIDMLQSPDVQLREMSAFALGRLAQDTHNQAGIAHNGGLVPLLKLLDSKNGSLQHNAAFALYGLADNEDNVSDFIRVGGVQRLQDGEFIVQATKDCVAKTLKRLEEKIHGRVLNHLLYLMRVSEKAVQRRAALALAHLCSADDQRTIFIDSGGLELLIGLLGSSSPKQQLDGAVALWKLANKAMTLSPIDAAPPSPTPQVYLGEQYVNNATLSDVTFLVEGKRFYAHRICLLASSDAFRAMFDGGYREKDARDIEIPNIRWEVFELMMRFIYTGSVDITLDIAQDLLRAADQYLLEGLKRLCEYTIAQDISLGNVSSMYELSEAFNAISLRHTCILFILEQFDKLSARPGHSHLVQRTIPEIRNYFAKALTKANTHNFRL 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01687 706 SUPERFAMILY ARM repeat 70 506 IPR016024 -
Bva10g01687 706 Gene3D Potassium Channel Kv1.1; Chain A 520 665 IPR011333 -
Bva10g01687 706 PANTHER ARM REPEAT PROTEIN INTERACTING WITH ABF2 9 700 IPR044282 -
Bva10g01687 706 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 363 405 IPR000225 GO:0005515
Bva10g01687 706 Gene3D - 415 513 IPR011989 -
Bva10g01687 706 Gene3D - 48 350 IPR011989 -
Bva10g01687 706 Pfam BTB/POZ domain 532 634 IPR000210 GO:0005515
Bva10g01687 706 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 146 196 IPR000225 GO:0005515
Bva10g01687 706 SMART BTB_4 539 636 IPR000210 GO:0005515
Bva10g01687 706 SUPERFAMILY POZ domain 531 633 IPR011333 -
Bva10g01687 706 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 93 147 IPR000225 GO:0005515
Bva10g01687 706 Gene3D - 351 412 IPR011989 -
Bva10g01687 706 SMART arm_5 269 309 IPR000225 GO:0005515
Bva10g01687 706 SMART arm_5 185 225 IPR000225 GO:0005515
Bva10g01687 706 SMART arm_5 311 351 IPR000225 GO:0005515
Bva10g01687 706 SMART arm_5 352 392 IPR000225 GO:0005515
Bva10g01687 706 SMART arm_5 135 183 IPR000225 GO:0005515
Bva10g01687 706 SMART arm_5 227 267 IPR000225 GO:0005515
Bva10g01687 706 SMART arm_5 467 507 IPR000225 GO:0005515
Bva10g01687 706 SMART arm_5 82 134 IPR000225 GO:0005515
Bva10g01687 706 ProSiteProfiles BTB domain profile. 539 606 IPR000210 GO:0005515
Bva10g01687 706 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 196 231 IPR000225 GO:0005515
Bva10g01687 706 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 9 700 - -
Bva10g01687 706 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 238 280 IPR000225 GO:0005515
Bva10g01687 706 Pfam Armadillo/beta-catenin-like repeat 227 266 IPR000225 GO:0005515
Bva10g01687 706 Pfam Armadillo/beta-catenin-like repeat 311 350 IPR000225 GO:0005515
Bva10g01687 706 Pfam Armadillo/beta-catenin-like repeat 192 224 IPR000225 GO:0005515
Bva10g01687 706 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 322 364 IPR000225 GO:0005515
Bva10g01687 706 CDD BTB_POZ_ARIA_plant 526 641 - -
Bva10g01687 706 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01687 Bva-Chr10 11266845 11272545 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01687 185 391 U-box Gene Family AT5G67340 28.846 1.42e-13 72.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Bva10g01687 BTB 3.3e-26 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01687 - - vvi:100249437 1242.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g01687 10 11266845 11272545 Bva10g01687 10 11266845 11272545 ECH