Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01686 ATGGCTGCTGCAGCTGAGACTGTGGAGTCCGTACAATGTTTCGGGCGGAAAAAAACCGCCGTTGCCGTCACCTACTGCAAGCGAGGTCGTGGCCTCATCAAGATCAATGGTTGTCCCATTGAGCTCGTGGAGCCGGAGATTCTCCGATTCAAGGCGTTCGAGCCCATCCTACTACTTGGACGACACCGTTTCGCTGGCGTTGACATGCGCATCAGGGTGAAGGGTGGAGGCCACACCTCACAGATCTACGCCATTCGTCAGAGCATCGCCAAGGCCTTGGTTGCCTTCTACCAGAAGTTTGTTGATGAGCAGAGCAAAAAGGAGATTAAGGATATTCTGGTGAGTTACGATAGGACTTTGCTGGTTGCTGATCCCAGACGCTGCGAGCCTAAGAAATTTGGTGGTCGTGGTGCCAGGGCCCGCTTCCAGAAATCTTATCGTTG 443 0.535 MAAAAETVESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAFEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKFVDEQSKKEIKDILVSYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01686 147 Pfam Ribosomal protein S9/S16 15 147 IPR000754 GO:0003735|GO:0005840|GO:0006412
Bva10g01686 147 PANTHER RIBOSOMAL PROTEIN S9 6 147 IPR000754 GO:0003735|GO:0005840|GO:0006412
Bva10g01686 147 ProSitePatterns Ribosomal protein S9 signature. 75 93 IPR020574 GO:0003735|GO:0005840|GO:0006412
Bva10g01686 147 Gene3D - 2 147 IPR014721 -
Bva10g01686 147 PANTHER - 6 147 - -
Bva10g01686 147 SUPERFAMILY Ribosomal protein S5 domain 2-like 10 147 IPR020568 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01686 Bva-Chr10 11252909 11253674 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01686 3 147 Cytoplasmic Ribosomal Protein Gene Family AT2G09990 86.207 6.75e-93 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01686 K02960 - qsu:111991747 281.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g01686 10 11252909 11253674 Bva10g01686 10 11252909 11253674 ECH