Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01682 ATGGCTATGGTAGAGAGCATTGTGactctctttcttctccttatgCTGCTTCTGATAATCGTGATCATCTTCTTTGCCTGTAGACCATGGCggttctttttctcttcacgTTCCCGGGCCATCGagGTTGGTGGTGACATAGAGAGGCCCCTTGTCTCAGATGAAGTAAATTTGTTACATGACCAAAGTAATGAATTACATAGAGATTATGATCTCGAGGGAGCAAGCCTTCCAGATGCAAATGAAGCCCATTTTCCTTCACCCCGAAGCCATGGACTTGTTCACAAGCAGAGGCTTCCTGTTAATTCTCCCAATGTACTTCAAGGCGATAGCTTGGTTCTAGATGTAGTTTCTGATTCTCCAGAAGATGTTGTGGTTGGTCAGACCCTTAAGCTACCTCCATCTCAGTTAGCAGAAATTCAAAAGCAAAGTAGATCGAATTTTGAAAGTAGACTTGTGCAAGGGGACATCTTAGACCaaaTTAGAAGTGCAGGAAGTTGCCTCACTCTGGAGGTTATCAGCGGGCCAGCTTCTGGGCTTCGTTGTTCTGTGCAGTCAACAAATCCATCTAGACTACCATTGACATTGGGAAGGCTTTCAAAAGATATACCAATAAATGATAATGAAGTGTCTGGAAAGCATGCACTAATACAGTGGAGTTCAGATAAAACGAAATGGGAGGTGGTAGATATGGGTAGCTTGAATGGAACATATTTGAATTCTCATCCAATCCACCATCCAGACATTGGAAGCAGGCATTGGGGTGACCCAATTGGGCTTGCTAACGGagatatcttaaaatttggaACAAAATCACAAGTAATTGTTCATATTACTTCTCAAAGTATGCATCACATTCCCTTTGGAGTAGGTATGGCATCAGATCCCATGTCTATGCGGCGAGGAGGAAAGAAGCTTCCTATGGAAGATGTTTGCTATTATCACTGGCCTCTACCTGGGCTAGATCAGTTTGGACTGTTTGGCATTTGTGATGGGCATGGAGGAGATGGGGCTGCCAAATCTGCTAGCAAaCTCTTGCCTGAGATCGTTGCTAATTTATTGTCTGATTCattaaaaagagagagggtGTTATCACTCCATGATGCCTCAGATGTTCTTAGAGAAGCATTTTGTCAGACAGAATCATGCCTAAATCATCCTTATGAGGGGTGTACAGCAACAGTGCTTCTGGTGTGGGCAGATGGTGATGAAAACTTCTTCGCGCAATGTGCAAATGTTGGTGACTCTTCCTGTGTTATGAATGTTGATGGGCAACAAATTAAGATGTCAGAAGatcataaaatatcaaatatttctgAAAGACTAAGGATCGGAGAGGCAGGTGAACCATTGAAAGATGGGGAAACGCGTCTATATGGTATAAATCTCGCAAGGATGCTCGGAGACAAATTTCTTAAACAGCAGGATCCCCGGTTCAGTTCGGAGCCTTATATAAGTGAAGTTGTGCGTATTGCTCAAGCAAGCAAATCATTTGCCTTACTAGCAAGTGATGGACTTTGGGATGTCATCAGCCACAAGAAGGCAATTCAGCTAGTGCATCAGATGAGGGAGAAAAACTCAGAGGAAGGAAATAATTCTGCAGAAAAGATTGCTAATTTCTTGTTGAATGAGGCTAAAACACTCAGAACAAAGGATAATACCTCTGTAATATTCTTAGATTTTGATACCTCCACCAACAATTTCACCTGTAAAGCTGAATCTTA 1724 0.4043 MAMVESIVTLFLLLMLLLIIVIIFFACRPWRFFFSSRSRAIEVGGDIERPLVSDEVNLLHDQSNELHRDYDLEGASLPDANEAHFPSPRSHGLVHKQRLPVNSPNVLQGDSLVLDVVSDSPEDVVVGQTLKLPPSQLAEIQKQSRSNFESRLVQGDILDQIRSAGSCLTLEVISGPASGLRCSVQSTNPSRLPLTLGRLSKDIPINDNEVSGKHALIQWSSDKTKWEVVDMGSLNGTYLNSHPIHHPDIGSRHWGDPIGLANGDILKFGTKSQVIVHITSQSMHHIPFGVGMASDPMSMRRGGKKLPMEDVCYYHWPLPGLDQFGLFGICDGHGGDGAAKSASKLLPEIVANLLSDSLKRERVLSLHDASDVLREAFCQTESCLNHPYEGCTATVLLVWADGDENFFAQCANVGDSSCVMNVDGQQIKMSEDHKISNISERLRIGEAGEPLKDGETRLYGINLARMLGDKFLKQQDPRFSSEPYISEVVRIAQASKSFALLASDGLWDVISHKKAIQLVHQMREKNSEEGNNSAEKIANFLLNEAKTLRTKDNTSVIFLDFDTSTNNFTCKAES 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01682 574 CDD PP2Cc 297 561 IPR001932 -
Bva10g01682 574 Pfam Protein phosphatase 2C 297 554 IPR001932 -
Bva10g01682 574 PANTHER PROTEIN PHOSPHATASE 2C 30 572 IPR015655 GO:0004722|GO:0006470
Bva10g01682 574 SUPERFAMILY PP2C-like 301 562 IPR036457 -
Bva10g01682 574 SUPERFAMILY SMAD/FHA domain 167 275 IPR008984 GO:0005515
Bva10g01682 574 Gene3D - 296 573 IPR036457 -
Bva10g01682 574 PANTHER PROTEIN PHOSPHATASE 2C 70 30 572 - -
Bva10g01682 574 SMART FHA_2 193 244 IPR000253 GO:0005515
Bva10g01682 574 ProSiteProfiles Forkhead-associated (FHA) domain profile. 194 244 IPR000253 GO:0005515
Bva10g01682 574 ProSiteProfiles PPM-type phosphatase domain profile. 289 561 IPR001932 -
Bva10g01682 574 ProSitePatterns PPM-type phosphatase domain signature. 326 334 IPR000222 GO:0043169
Bva10g01682 574 CDD FHA 168 272 IPR000253 GO:0005515
Bva10g01682 574 Gene3D - 162 295 - -
Bva10g01682 574 SMART PP2C_4 283 559 IPR001932 -
Bva10g01682 574 Pfam FHA domain 195 269 IPR000253 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01682 Bva-Chr10 11224564 11231126 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01682 1 564 PP2C-type Phosphatase Gene Family AT5G19280 56.902 0.0 634
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01682 K01090 - gmx:100170643 749.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g01682 10 11224564 11231126 Bva10g01682 10 11224564 11231126 ECH