Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01680 ATGCAAGAGTTTCTGGGATCGGTTCGCCGATCCTTGGTCTTCAGAAGCACAAGCAATGATGATGGAGGGTTTGGTGGCCTCGTAGATAAGATCGGCTCCAGCATTCGAAAATCGAGAATTGGGCTGTTCTCTCAGCCACGGGTGAGGGCTCTGCCGCCGGTTCCTAGAGATAATGCGCCTCCGATCCGGTGGCGGAAGGGTGAATTGATTGGTTGTGGTGCGTTTGGTCGGGTCTATATGGGAATGAAACTTGATTCTGGAGAGCTTATTGCAGTAAAACAGGTTTTAATCGCGGCAAACAACGcttcaaaagagaaaacgCAGGCTCATATTCGCGAGcttgaagaagaagtaaaGCTTCTGAAGAATCTTAAACATCCAAATATTGTCAGATACTTGGGAACTGCTAGAGAGGAGGATTCCTTGAATATTCTCTTGGAATTTGTACCGGGTGGATCTATCTCATCATTATTGGGGAAATTTGGATCCTTCCCCGAGTCTGTTATAAAAATGTATACAAAACAACTCTTACTGGGTCTTGAATATCTTCACAGGAATGGAATTATTCACAGGGATATTAAGGGTGCAAATATTCTAGTTGATAATAAAGGATGCATTAAGCTTGCAGACTTTGGTGCATCCAAGAAAGTAGTTGAACTGGCAACCATTAATGGTGCAAAATCAATGAAGGGCACTCCATATTGGATGGCTCCTGAAGTTATTTTGCAGACAGGACATAGCTTttctgctGATATATGGAGTGTTGGTTGCACTGTGATAGAGATGGCCACTGGGAAGCCTCCATGGAGCCAACAATATCAGGAGGTTGCTGCTCTTTTCCACATTGGGACAACTAAATCTCATCCACCTATACCTGAACACCTTTCTTCTGAGGCAAAggattttttgttgaaatgcTTACAGGAGGAACCAAATCTAAGGCCATCTGCATCAGAATTGTTACAGCATCCATTTATCACTGGCGAGTATCAGGACAGACATCCAATTTTACACAGTTCTGTTGGGGAACCTGGTAACCCGATGGCAGCATCTGGGATGAACTCTAGAAACTTGGGATCAAGCTGCACTAGTCTAAAGGATGTCTGTCAGATGGATAGCATTAGGTGCTCAACTGTATATCCTGAAAGTGTTCTAAAAGCAGGTTTCTACCGAGGAGCAGGAGATGATGATGACATGTGTCAGATTGATGATCAAGATGATCTTGTGGTTGGTGCATTAGTAAAGTCTAAGCCCTTCTTTGCATCTAATGACATAAAGAGTCTCAATCCTATGTGTGAACCTGAGGAAGATTGGCCATGCAAGTTTGAAGAAAATCTAAATATGGAGAAAAGCAGAGTGAACTTGTCTCCTGATCAAACAATGAGCAAGACTATGAGAAACCCTGAAGTATTCCCAGAGGTGGAGAACAACTTCTCTTTTCCAAGCGAACCTTTAGGTGCTGAGGACGATGATGAAGTCACAGAATCAAAAATTAGAGCTTTCTTGGATGAAAAGGCATTGGAACTGAAGAAACTCCAAACAGAATTCTTAAGTGTATCAAATGCAGCTGTTCCCTCTGCATCTGTAGCCATTTCACACAGTGAAATTGTTGCAGATGCCTTGAATGTAACACCAAATAGCAAGTCACCTAGTCAGGCTAGCAGACGATTCTCAGTGGCTGGTGGTGCCAATCTTGCAAGCTCTGGTTGTCATAACAGATATCAATCAAAAGTTAGTGGTGTACATGGTCGACCTTTGCAGGAAATCCAGCCATCTGAGCTTAACGAATGGAAAGAAGTTCTTCATGATGCTCAGATGGAATCTAGTGTTAGCTCAAGCTTCTCTGAGAGACAGCGGAAATGGGAAGAAGAACTTGCTGAAGAGCTTGAGCTTGCAAGAAAGAGAGAGATGAGGCGTCAGGGAGGCTTAGGAGGGAAGGTAACATCCCCAAAGCATCGCAATTTTCATAAGCAGACTAATGCAGAGGCGGATCCACGTTTTAGCTTGTggaattataagaataaata 2027 0.4208 MQEFLGSVRRSLVFRSTSNDDGGFGGLVDKIGSSIRKSRIGLFSQPRVRALPPVPRDNAPPIRWRKGELIGCGAFGRVYMGMKLDSGELIAVKQVLIAANNASKEKTQAHIRELEEEVKLLKNLKHPNIVRYLGTAREEDSLNILLEFVPGGSISSLLGKFGSFPESVIKMYTKQLLLGLEYLHRNGIIHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPEHLSSEAKDFLLKCLQEEPNLRPSASELLQHPFITGEYQDRHPILHSSVGEPGNPMAASGMNSRNLGSSCTSLKDVCQMDSIRCSTVYPESVLKAGFYRGAGDDDDMCQIDDQDDLVVGALVKSKPFFASNDIKSLNPMCEPEEDWPCKFEENLNMEKSRVNLSPDQTMSKTMRNPEVFPEVENNFSFPSEPLGAEDDDEVTESKIRAFLDEKALELKKLQTEFLSVSNAAVPSASVAISHSEIVADALNVTPNSKSPSQASRRFSVAGGANLASSGCHNRYQSKVSGVHGRPLQEIQPSELNEWKEVLHDAQMESSVSSSFSERQRKWEEELAEELELARKREMRRQGGLGGKVTSPKHRNFHKQTNAEADPRFSLWNYKNK 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01680 675 CDD STKc_MAPKKK 63 326 - -
Bva10g01680 675 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 46 549 - -
Bva10g01680 675 SUPERFAMILY Protein kinase-like (PK-like) 63 327 IPR011009 -
Bva10g01680 675 ProSiteProfiles Protein kinase domain profile. 64 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g01680 675 Coils Coil 97 124 - -
Bva10g01680 675 PANTHER MAP KINASE KINASE KINASE 46 549 - -
Bva10g01680 675 SMART serkin_6 64 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g01680 675 Pfam Protein kinase domain 65 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g01680 675 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672|GO:0006468
Bva10g01680 675 MobiDBLite consensus disorder prediction 638 675 - -
Bva10g01680 675 ProSitePatterns Protein kinases ATP-binding region signature. 70 93 IPR017441 GO:0005524
Bva10g01680 675 Gene3D Transferase(Phosphotransferase) domain 1 63 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01680 Bva-Chr10 11193200 11198171 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01680 1 653 MAP Kinase Kinase Kinase AT3G06030 57.377 0.0 693
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Bva10g01680 Pkinase 2e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01680 - K20606 jre:109005872 871.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g01680 10 11193200 11198171 Bva10g01680 10 11193200 11198171 ECH