Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01665 ATGGATCAACACCAGCAAGGACTGCCCAAGGGAGGGGTGAGTGGTTCTGCAGCACAGGCATCATATGGCATGAATCCATACCAATCAAACCAAACCATGACACCTGCTGTCCCTCATTCTTCTCCTGAAGTAGCAGGCCTGCCTGGCTCTTCATCCTACCTGAGAGAGCATCAGCTTGCTCAACAGTACGTCCACCAGCTACAGCAGCAAGAGTTGCAGCAACAACTCCAAAACTTCTGGGCAAATCAATACCAAGAAATCGATCAAGTTGCTGATTTCAAAAACCACAGCTTGCCTTTGGCTAGGATTAAGAAGATCATGAAGGCCGATGAGGATGTGAGGATGATATCAGCTGAAGCCCCAGTTATATTTGCCAGGGCCTGTGAAATGTTCATTCTGGAACTGACAATGAGGTCTTGGATTAAcgcagaagaaaacaaaaggagaaCTCTTCAGAAGAATGACATAGCAGCAGCAATCACAAGAACTGATGTGTTTGATTTTCTGGTTGATATTGTCCCCAGGGATGACTTGAAAGATGACATTTACGCAGGCATCACAAAAGCAGGCAATGCTGCGGTTGGAGGTCCAGCTGAGCGTGCTCCTTATTATTATATGCCACCGCAACATGTTCCATCTCCATATGTTCCTCCAAGAATTATCATGGGGAGGCCTGTAGATGATCAAGCTCATTATGGGCAGCAAACTCACCCTTATCCAGCTCAAATGTGGCCTCAACAGCAGAATCCTCCGGCAGATTCTGATTCATG 770 0.4545 MDQHQQGLPKGGVSGSAAQASYGMNPYQSNQTMTPAVPHSSPEVAGLPGSSSYLREHQLAQQYVHQLQQQELQQQLQNFWANQYQEIDQVADFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTMRSWINAEENKRRTLQKNDIAAAITRTDVFDFLVDIVPRDDLKDDIYAGITKAGNAAVGGPAERAPYYYMPPQHVPSPYVPPRIIMGRPVDDQAHYGQQTHPYPAQMWPQQQNPPADSDS 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01665 256 MobiDBLite consensus disorder prediction 235 256 - -
Bva10g01665 256 Pfam Core histone H2A/H2B/H3/H4 91 160 IPR007125 GO:0003677
Bva10g01665 256 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 1 249 - -
Bva10g01665 256 SUPERFAMILY Histone-fold 67 169 IPR009072 GO:0046982
Bva10g01665 256 Gene3D Histone, subunit A 59 175 IPR009072 GO:0046982
Bva10g01665 256 MobiDBLite consensus disorder prediction 1 38 - -
Bva10g01665 256 MobiDBLite consensus disorder prediction 228 256 - -
Bva10g01665 256 MobiDBLite consensus disorder prediction 1 50 - -
Bva10g01665 256 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-9 1 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01665 Bva-Chr10 11138209 11140446 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01665 15 250 CCAAT-HAP5 Transcription Factor Family AT1G54830 53.112 4.21e-70 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Bva10g01665 CBFD_NFYB_HMF 3.4e-17 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01665 K08066 - jre:109010478 311.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g01665 10 11138209 11140446 Bva10g01665 10 11138209 11140446 ECH