Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bva10g01665 | ATGGATCAACACCAGCAAGGACTGCCCAAGGGAGGGGTGAGTGGTTCTGCAGCACAGGCATCATATGGCATGAATCCATACCAATCAAACCAAACCATGACACCTGCTGTCCCTCATTCTTCTCCTGAAGTAGCAGGCCTGCCTGGCTCTTCATCCTACCTGAGAGAGCATCAGCTTGCTCAACAGTACGTCCACCAGCTACAGCAGCAAGAGTTGCAGCAACAACTCCAAAACTTCTGGGCAAATCAATACCAAGAAATCGATCAAGTTGCTGATTTCAAAAACCACAGCTTGCCTTTGGCTAGGATTAAGAAGATCATGAAGGCCGATGAGGATGTGAGGATGATATCAGCTGAAGCCCCAGTTATATTTGCCAGGGCCTGTGAAATGTTCATTCTGGAACTGACAATGAGGTCTTGGATTAAcgcagaagaaaacaaaaggagaaCTCTTCAGAAGAATGACATAGCAGCAGCAATCACAAGAACTGATGTGTTTGATTTTCTGGTTGATATTGTCCCCAGGGATGACTTGAAAGATGACATTTACGCAGGCATCACAAAAGCAGGCAATGCTGCGGTTGGAGGTCCAGCTGAGCGTGCTCCTTATTATTATATGCCACCGCAACATGTTCCATCTCCATATGTTCCTCCAAGAATTATCATGGGGAGGCCTGTAGATGATCAAGCTCATTATGGGCAGCAAACTCACCCTTATCCAGCTCAAATGTGGCCTCAACAGCAGAATCCTCCGGCAGATTCTGATTCATG | 770 | 0.4545 | MDQHQQGLPKGGVSGSAAQASYGMNPYQSNQTMTPAVPHSSPEVAGLPGSSSYLREHQLAQQYVHQLQQQELQQQLQNFWANQYQEIDQVADFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTMRSWINAEENKRRTLQKNDIAAAITRTDVFDFLVDIVPRDDLKDDIYAGITKAGNAAVGGPAERAPYYYMPPQHVPSPYVPPRIIMGRPVDDQAHYGQQTHPYPAQMWPQQQNPPADSDS | 256 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bva10g01665 | 256 | MobiDBLite | consensus disorder prediction | 235 | 256 | - | - | |
Bva10g01665 | 256 | Pfam | Core histone H2A/H2B/H3/H4 | 91 | 160 | IPR007125 | GO:0003677 | |
Bva10g01665 | 256 | PANTHER | HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED | 1 | 249 | - | - | |
Bva10g01665 | 256 | SUPERFAMILY | Histone-fold | 67 | 169 | IPR009072 | GO:0046982 | |
Bva10g01665 | 256 | Gene3D | Histone, subunit A | 59 | 175 | IPR009072 | GO:0046982 | |
Bva10g01665 | 256 | MobiDBLite | consensus disorder prediction | 1 | 38 | - | - | |
Bva10g01665 | 256 | MobiDBLite | consensus disorder prediction | 228 | 256 | - | - | |
Bva10g01665 | 256 | MobiDBLite | consensus disorder prediction | 1 | 50 | - | - | |
Bva10g01665 | 256 | PANTHER | NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-9 | 1 | 249 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bva10g01665 | Bva-Chr10 | 11138209 | 11140446 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bva10g01665 | 15 | 250 | CCAAT-HAP5 Transcription Factor Family | AT1G54830 | 53.112 | 4.21e-70 | 213 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | NF-YC | Bva10g01665 | CBFD_NFYB_HMF | 3.4e-17 | CL0012 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bva10g01665 | K08066 | - | jre:109010478 | 311.227 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Bva10g01665 | 10 | 11138209 | 11140446 | Bva10g01665 | 10 | 11138209 | 11140446 | ECH |