Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01662 ATGAAAGCAATGCTTGAAAAGCAACCATCTCCAGATAATTCAAATTATGCATCAAGCAGTGGTCTTTCTGCAGATGATAAGGAAACTGGAAGCAGCGCTGCAATATCTAACCATCAATATGTTTTGGTTAACAACTCTTCTTCACACAGATTGCCTTTCAAAATTGACCTCAATTCTGCTCGCATGGTCATGGCAGAGGTGGTGggaacttttattttgatgttctGTGTGTGTGGAATCATGGCAACCACGCAATACCAAAATGGCCAAGTGGGTCTTCTGGAGTATGCAGCTACCGCAGGATTAACAGTGGTTGTGATAATTTTCTCTATAGGAAAAATCTCTTGTGCGCATGTAAACCCAGCTGTCACAATAGCTTTTGCAACATCTGGTCAATTTCCATGGTCCAAGGTTCCAATATACATAACCGCACAAACAGTGGGTTCTGTATTGGCAACATACATTGGTGGCCTTGTTTATGGCATAAGATCAGATGTTATGATGACCAGGCCACTCCAAGGGTGCGTTTCTGCCTTCTCGGTGGAGCTCATTGCaactttcatcatcatgttcCTTGCTGCAGCTTTGATATGTGAATCTGAACCAGTCGCTCATTTATCTGGTTTTGTTGTTGGAATAGCTATTGGACTAGCTGTGTTAATCACAGGTCCTGTTTCAGGTGGATCAATGAACCCTGCAAGATCATTAGGTCCAGCAATTCTTTCGTGGAAATTCAAGGAGATCTGGATATATATCACTGCCCCAGTTGCTGGATCTGTGGCTGGTGCTCTAATGTTTCGTCTTCTACGCCTCCAGCACCAACCCTACAATCCTCCTTCCTCCATGAACCCTGGATCTATTGGCCATTCAATATCCTTCAGTGGAAGTTA 890 0.4202 MKAMLEKQPSPDNSNYASSSGLSADDKETGSSAAISNHQYVLVNNSSSHRLPFKIDLNSARMVMAEVVGTFILMFCVCGIMATTQYQNGQVGLLEYAATAGLTVVVIIFSIGKISCAHVNPAVTIAFATSGQFPWSKVPIYITAQTVGSVLATYIGGLVYGIRSDVMMTRPLQGCVSAFSVELIATFIIMFLAAALICESEPVAHLSGFVVGIAIGLAVLITGPVSGGSMNPARSLGPAILSWKFKEIWIYITAPVAGSVAGALMFRLLRLQHQPYNPPSSMNPGSIGHSISFSGS 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01662 296 PANTHER AQUAPORIN NIP7-1-RELATED 9 292 - -
Bva10g01662 296 SUPERFAMILY Aquaporin-like 58 278 IPR023271 -
Bva10g01662 296 MobiDBLite consensus disorder prediction 8 29 - -
Bva10g01662 296 Gene3D Glycerol uptake facilitator protein. 21 281 IPR023271 -
Bva10g01662 296 Pfam Major intrinsic protein 58 266 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva10g01662 296 PANTHER AQUAPORIN NIP2-1 9 292 IPR034294 -
Bva10g01662 296 PRINTS Major intrinsic protein family signature 212 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva10g01662 296 PRINTS Major intrinsic protein family signature 61 80 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva10g01662 296 PRINTS Major intrinsic protein family signature 181 199 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva10g01662 296 PRINTS Major intrinsic protein family signature 249 269 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva10g01662 296 PRINTS Major intrinsic protein family signature 137 156 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva10g01662 296 PRINTS Major intrinsic protein family signature 100 124 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva10g01662 296 ProSitePatterns MIP family signature. 118 126 IPR022357 -
Bva10g01662 296 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01662 Bva-Chr10 11119781 11121220 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01662 137 275 Major Intrinsic Protein MIP AT3G06100 56.429 1.83e-51 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01662 K09874 - mtr:MTR_1g070385 407.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g01662 10 11119781 11121220 Bva10g01662 10 11119781 11121220 ECH