Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01658 ATGTCTCACATAGCCGTCGAGAGGAACAGAAGAAGACAGATGAATGAACATCTCAAAGTCTTGAGGTCCTTGACTCCATGTTTCTATGTCAAAAGGGGAGATCAAGCATCTATCATTGGTGGTGTAATAGAATTCATCAAGGAGTTACACCAAGTTCTCCAAGCTTTGGAGTCCAAGAAACGAAGGAAGAGTTTGAGCCCTAGCCCTGGCCCCAGCCCTACCACTCCAAGAACGCTCATGCAGCCAGCCCTAGAACTTGATACCCCCTTTAGAATTGGGGTTGATTCTTTTAAGGAACTAGGAGCAAGCTGCAACTCTTCAGTGGCAGATGTGGAAGTGAAAATTTCGGGGCCAAACGTGATATTGAAAGTGATTTCTCACAGAATTCCGGGTCAAGTTGCTAAGATCATCAGTATTTTGGAAAGGCTTTCATTTGAAGTCCTTCATCTGAACATCAGTAGCATGGAAGATACAGTCCTTTACCACCTTGTTGTCAAGATAGGGTTGGAATGTCAACTAAGTCTGGAGGAACTAGCAATGGAAGTGCAAAAAAGCTTTTGCCCAGATGCTGCTATTGCTATGGAGATATA 590 0.439 MSHIAVERNRRRQMNEHLKVLRSLTPCFYVKRGDQASIIGGVIEFIKELHQVLQALESKKRRKSLSPSPGPSPTTPRTLMQPALELDTPFRIGVDSFKELGASCNSSVADVEVKISGPNVILKVISHRIPGQVAKIISILERLSFEVLHLNISSMEDTVLYHLVVKIGLECQLSLEELAMEVQKSFCPDAAIAMEI 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01658 196 Gene3D - 1 64 IPR036638 GO:0046983
Bva10g01658 196 PANTHER TRANSCRIPTION FACTOR FAMA 1 192 IPR044283 GO:0003700|GO:0010052
Bva10g01658 196 SMART finulus 4 55 IPR011598 GO:0046983
Bva10g01658 196 Pfam Helix-loop-helix DNA-binding domain 2 49 IPR011598 GO:0046983
Bva10g01658 196 CDD bHLH_AtFAMA_like 1 63 - -
Bva10g01658 196 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 1 49 IPR011598 GO:0046983
Bva10g01658 196 PANTHER TRANSCRIPTION FACTOR MUTE 1 192 - -
Bva10g01658 196 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 1 68 IPR036638 GO:0046983
Bva10g01658 196 MobiDBLite consensus disorder prediction 60 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01658 Bva-Chr10 11097557 11102794 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01658 1 192 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06120 66.169 1.71e-87 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bva10g01658 HLH 2.6e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01658 - - gmx:100785890 286.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g01658 10 11097557 11102794 Bva10g01658 10 11097557 11102794 ECH