Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01631 ATGGCTTCAAGGCGCCTTCTTTCCTTCATTTCTCCATCCATTTCCTCTTCTCGCATATCCCATTTCCCCCTCTCCAATTTGCTTTGCAGCAATGCAACTGGGTTAGGCCTTGTTCCGCTATGGAGATCCATGGCCACCTTCGCTCGAACAAAGCCCCATGTAAATGTGGGGACCATTGGACATGTAGATCATGGGAAAACCACATTAACTGCTGCAATTACAAAGGTGCTATCTGAAGAAGGTAAAGCCAAGGCTATTGCATTTGAAGAGATAGACAAGGCTCCtgaggagaagaaaagaggaattACTATTGCTACAGCCCATGTAGAGTATGAGACATCTAAAAGGCACTACGCCCATGTTGATTGCCCAGGACACGCAGACTATGTGAAGAACATGATAACCGGGGCTGCTCAAATGGATGGTGGAATTCTTGTTGTTTCTGCTTCAGATGGACCTATGCCTCAAACAAAGGAGCATATACTGCTTGCCCGTCAGGTCGGTGTGCCATCATTGGTCTGCTTTCTAAATAAGGTTGATACTGTTGACGACCCAGAATTACTTGAACTTATCGAAATGGAGCTTCGTGAACTGCTTAGCTTCTACAAGTTTCCCGGGGATGAGATCCCAATTGTGCGAGGTTCAGCCTTGTCTGCTTTGCAGGGGACAAATGAAGAACTTGGAAAGAAGGCTGTATTAGAACTAATGGATGCTGTGGATAAATACATTTCTGATCCTGTGCGCCAGCTTGACAAACCTTTTTTGATGCCTGTAGAAGATGTTTTCTCAATTCAGTTAAGCAGAGACATCAAAAGCTTTCTTGAATACCAAACTGCAATACAATTACTGGGACGTGGAACTGTTGTAACTGGTCGGGTTGAACAAGGCACCATTAAAATTGGTGaggaaattgaaatattgGGGTTGCAGGGTGGGTCTTTGAAGACTACAGTAACTGGGGTTGAAAtgttcaagaaaattttggatcGTGGGGAAGCTGGTGATAATGTGGGTCTTCTTCTACGTGGTTTGAAGCGAGATGATGTGCAGCGAGGCATGGTAGTCTCAAAGCCTGGTGCGTTGAAAACGTATAAGAAGTTTGAGGCAGAGATTTACGTCCTCACAAAAGATGAAGGTGGCCGCCATACTGCTTTCTTCTCAAATTATATGCCCCAGTTTTACATGAGGACTGCAGATATTACGGGGAAGGTGCTACTACCCGAGAATGTTAAGATGGTTATGCCCGGTGATAATGTTACTGCAACTTTTGAGCTGATATTACCTGTCCCTCTTGAAGCAGGTAGGTTGACTTCTAGACACAGACAAAGATTTGCTTTGAGAGAAGGAGGCAGAACAGTTGGTGCTGGAGTCGTCACCAAAGTGATTGAGTA 1391 0.4328 MASRRLLSFISPSISSSRISHFPLSNLLCSNATGLGLVPLWRSMATFARTKPHVNVGTIGHVDHGKTTLTAAITKVLSEEGKAKAIAFEEIDKAPEEKKRGITIATAHVEYETSKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSASDGPMPQTKEHILLARQVGVPSLVCFLNKVDTVDDPELLELIEMELRELLSFYKFPGDEIPIVRGSALSALQGTNEELGKKAVLELMDAVDKYISDPVRQLDKPFLMPVEDVFSIQLSRDIKSFLEYQTAIQLLGRGTVVTGRVEQGTIKIGEEIEILGLQGGSLKTTVTGVEMFKKILDRGEAGDNVGLLLRGLKRDDVQRGMVVSKPGALKTYKKFEAEIYVLTKDEGGRHTAFFSNYMPQFYMRTADITGKVLLPENVKMVMPGDNVTATFELILPVPLEAGQRFALREGGRTVGAGVVTKVIE 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01631 456 Pfam Elongation factor Tu domain 2 286 355 IPR004161 GO:0005525
Bva10g01631 456 CDD EFTU_III 362 451 - -
Bva10g01631 456 CDD EF_Tu 52 246 IPR041709 -
Bva10g01631 456 Hamap Elongation factor Tu [tuf]. 42 456 IPR004541 GO:0003746|GO:0005525|GO:0006414
Bva10g01631 456 Pfam Elongation factor Tu GTP binding domain 51 243 IPR000795 GO:0003924|GO:0005525
Bva10g01631 456 PANTHER ELONGATION FACTOR TU 11 455 - -
Bva10g01631 456 Pfam Elongation factor Tu C-terminal domain 361 454 IPR004160 -
Bva10g01631 456 Gene3D Translation factors 273 396 - -
Bva10g01631 456 TIGRFAM small_GTP: small GTP-binding protein domain 54 186 IPR005225 GO:0005525
Bva10g01631 456 CDD EFTU_II 254 359 IPR033720 -
Bva10g01631 456 PRINTS GTP-binding elongation factor signature 172 181 IPR000795 GO:0003924|GO:0005525
Bva10g01631 456 PRINTS GTP-binding elongation factor signature 99 107 IPR000795 GO:0003924|GO:0005525
Bva10g01631 456 PRINTS GTP-binding elongation factor signature 119 129 IPR000795 GO:0003924|GO:0005525
Bva10g01631 456 PRINTS GTP-binding elongation factor signature 55 68 IPR000795 GO:0003924|GO:0005525
Bva10g01631 456 PRINTS GTP-binding elongation factor signature 135 146 IPR000795 GO:0003924|GO:0005525
Bva10g01631 456 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 51 247 IPR000795 GO:0003924|GO:0005525
Bva10g01631 456 PANTHER ELONGATION FACTOR TU-RELATED 11 455 - -
Bva10g01631 456 TIGRFAM EF-Tu: translation elongation factor Tu 43 456 IPR004541 GO:0003746|GO:0005525|GO:0006414
Bva10g01631 456 Gene3D - 43 246 IPR027417 -
Bva10g01631 456 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 365 456 IPR009001 -
Bva10g01631 456 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 48 262 IPR027417 -
Bva10g01631 456 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 92 107 IPR031157 -
Bva10g01631 456 Gene3D Translation factors 400 455 - -
Bva10g01631 456 SUPERFAMILY Translation proteins 248 361 IPR009000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01631 Bva-Chr10 10921114 10924607 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01631 47 454 Eukaryotic Initiation Factors Gene Family AT5G60390 29.677 2.02e-40 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01631 K02358 - gmx:102667962 705.671