Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01609 ATGGGTTGTGTTCATGGCAAGTGTTGTAGCCGCTACCCAGCACCATCTGAGGGCGGTTCCCGGGACTACAGGGAAGTGGGTCTATATCGTGCCCAAAGGAAGCACATACTAACTCAGAGATCATTGGAGTGTGTTCCCGTTCCTTCCCACAACTTCATTTTAGAATACTCTGTTCTCACACAGCGGGGATACTACCCAGATTCACCTGACAAAGAAAACCAAGACAGTTACTGCataaaaactcaaattcaaGGCAACCCAAGTGCCCATTTCTTTGGTGTCTATGATGGGCATGGTCAATTTGGCAGCCAGTGttcgaactttgttaaggatAGGTTGGTAGAGACATTGGCTGATGACCCTGCATTATTGGAGGACCCTGTTAAAGCTTATACTTCAGCATTCTTGACAACAAATTACGACTTACGCAGCAGTGAGATTGATGATTCTATGAGTGGCACTACTGCAATTACGGTGCTTGTTATTGGAGACTCCCTTTATGTTGCTAATGCTGGTGATTCGAGAGCAGTGGTAGCTGTTAAGGAAGGGAACCGCATTATTGCAGAGGACCTGTCTTCTGATCAGACACCATTTCGGAGAGACGAATGTGAGAGAGTCAAACTTTGTGGGGCAAGGGTGTTGAGTGTTGATCAGGTGGAAGGGCTCAAGGATCCAGAAATCCAGACTTGGGGTGATGAAGAGAGTCAGGGTGGTGATCCTCCAAGATTGTGGGTTCCTAATGGAATGTATCCTGGGACTGCATTTACAAGGAGTTTGGGAGATAGTCTAGCAGAGACTATTGGTGTCATTGCTGTTCCAGAGGTGTCAATGGTTCAGCTTACGCCTAATCatcctttctttattgttgCAAGTGATGGCGTATTTGAGTTCCTATCAAGCCAAACTGTTGTTGATATGGCAGCAAACTATAAGGATCCCCGCGATGCGTGTGCTGCCATTGCTGGAGAGTCATATAAACTATGGTTGGAACATGAGAACCGAACTGATGATATAACGATTATCATTGTTCAGATCAAAGGCCTATCTAATTCTGCTGAGGTTAATGTTAGTACTGCGAGAAGGACCAAGAAAGGAACTTCTGAGATATCAGCTGCCGGTGAGTCAGATGTTTATCGATCTGTGAGGAGCGATTTCTCTGATTTACAGTCCTGTCAACATGTGATGTCAATGAGAAGCCCAGCCATAGTGGTCCCGTCTCCAGCATGTCAAAGACCAATTGAATTGTA 1247 0.4419 MGCVHGKCCSRYPAPSEGGSRDYREVGLYRAQRKHILTQRSLECVPVPSHNFILEYSVLTQRGYYPDSPDKENQDSYCIKTQIQGNPSAHFFGVYDGHGQFGSQCSNFVKDRLVETLADDPALLEDPVKAYTSAFLTTNYDLRSSEIDDSMSGTTAITVLVIGDSLYVANAGDSRAVVAVKEGNRIIAEDLSSDQTPFRRDECERVKLCGARVLSVDQVEGLKDPEIQTWGDEESQGGDPPRLWVPNGMYPGTAFTRSLGDSLAETIGVIAVPEVSMVQLTPNHPFFIVASDGVFEFLSSQTVVDMAANYKDPRDACAAIAGESYKLWLEHENRTDDITIIIVQIKGLSNSAEVNVSTARRTKKGTSEISAAGESDVYRSVRSDFSDLQSCQHVMSMRSPAIVVPSPACQRPIEL 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01609 415 PANTHER PROTEIN PHOSPHATASE 2C AND CYCLIC NUCLEOTIDE-BINDING/KINASE DOMAIN-CONTAINING PROTEIN 23 410 - -
Bva10g01609 415 SMART PP2C_4 51 343 IPR001932 -
Bva10g01609 415 Gene3D - 50 347 IPR036457 -
Bva10g01609 415 CDD PP2Cc 71 345 IPR001932 -
Bva10g01609 415 ProSitePatterns PPM-type phosphatase domain signature. 91 99 IPR000222 GO:0043169
Bva10g01609 415 ProSiteProfiles PPM-type phosphatase domain profile. 55 345 IPR001932 -
Bva10g01609 415 PANTHER CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE 23 410 - -
Bva10g01609 415 SUPERFAMILY PP2C-like 42 347 IPR036457 -
Bva10g01609 415 Pfam Protein phosphatase 2C 81 319 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01609 Bva-Chr10 10837868 10841360 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01609 1 350 PP2C-type Phosphatase Gene Family AT3G06270 72.727 0.0 528
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01609 - - aprc:113872580 704.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g01609 10 10837868 10841360 Bva10g01609 10 10837868 10841360 ECH