Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01587 ATGAACATGGCAGAAATCAAGTacagatataattttaatgagaaGGCTATTGTGTTTTACGGTGTAAGATTTGACATTGTTTCTGACTTAGAAGCAATGCTAGAGAGAATGGAATCTTCCGAGTTTAGAAGTGGCAATTTTTCGCAAAATGACTTGGTGAAAGATCACTTGCTTTACATGTCTGCCGTTTTAAGGACATTTAGTCAGAGGCTTTCCCAGCAACGACATAGCATAATATCTGTAATTTCCAATGATTCCTTAAATTTGGCGTTAAGGGGATTCAATGATGCTGTGAATGGGTTTGTGGACGATGGTTGGTCTTTGATGGGTAATGATGGAGTGGAAGATGTGACAATGGCCATAAGCTCATCTCCCAACAAATTCTTTGGTTCCAATTACAATTCATCAGTGTTTCCCTCATTTGGAGGTGTGGTGCTGTGTGCCAAGGCATCAATGCTGTTCCAGTGTTA 470 0.3872 MNMAEIKYRYNFNEKAIVFYGVRFDIVSDLEAMLERMESSEFRSGNFSQNDLVKDHLLYMSAVLRTFSQRLSQQRHSIISVISNDSLNLALRGFNDAVNGFVDDGWSLMGNDGVEDVTMAISSSPNKFFGSNYNSSVFPSFGGVVLCAKASMLFQC 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01587 156 Pfam C-terminal regulatory domain of Threonine dehydratase 2 57 IPR001721 -
Bva10g01587 156 SUPERFAMILY ACT-like 2 60 IPR045865 -
Bva10g01587 156 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 88 155 IPR044830 GO:0003700
Bva10g01587 156 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 88 155 - -
Bva10g01587 156 Gene3D Biosynthetic Threonine Deaminase; Domain 3 1 86 IPR038110 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01587 Bva-Chr10 10744802 10745919 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01587 62 155 Homeobox Transcription Factor Family AT2G34710 60.638 4.09e-29 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01587 K09338 - gmx:100779499 124.79