Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01575 atGGAATGCAACAAAGAGGAGGCCGTAAGGGCCAAGAGCATTGCTTTAATGAAGATGGAAAGCAGGGATTTCACAGGGGCTCAGAAATTAGCTCGTAAGGCACAACAACTATATCCTGATCTGGAGAATATAGCTCAGATGCTTGTTGTGTGTGATGTGCATTGTTCTGCTGAGCAGAAATTGTTTGGTAATGAGATGGATTGGTATGGAATTCTTCAAATTGAGCAGACAGCCAATGAGGCAACAATTAAGAAGCAATACAGGAAGTtagctcttcttcttcatcctgACAAAAACAAGTTTGCTGGTGCAGAAGCTGCATTTAAGCTGATTGGGGAAGCTTCAAGAGTACTTACAGACAGAGATAAACGGGCTTTGCATGACATAAAGCGTAGATCTTCTATGAATAAACCTGCAGTGTCACATCGTCCACCTCAGAAGGCTTATACAGACCTAAATGCTGGGATGCAAAACAATGTCAGGAACAATTTTACAAACATATATCCTCAGCATCAGCAGTTTAGGCATCAAGGTCAACAAGGGCCCAAAGGTGAACACCCTGAACAGCAGCAGTCTCGGCAGCAAGGTCAGCAGGGCCCCAATGTTGAACGCCCTCCACATCAGCAGTCCAGGCAACCTGGTCAACAGTCCAATGGTGAACGCGCTACGTTTTGGACTGTCTGCCCATTTTGTTCTGTTAAATATCAGTATTAcactgaaattttaaataaatatgttcgCTGTCAAAGTTGCGGTGTGTCGTTTGTTGCGATTAATGTGAATGTGCAAGTGACGTCACCAGCAACTAATACAAATACTGAGAATTCCAGCAAAGAGCCTCTCAAGAAGAAAGGCCTTTCATCCTATACTGTTTCTGGAAACATGaatggaaagaagaagaggaaaaagacaGCAGAATCCAGTGAAAGTTCTGATTCTATTGGTAGCACTGATTCTGAAGAAGATGTGGTCACTGATGAGGCTGGTATTTTCAGTGAACAAAACCATTCAACTCATAGAGAAGAGAATCCCCGTAGATCTGCACGGCAAAAGCAGCAGGTTTCTTACAATGAGAACAGAAGTGATGATGAGGACAATGATTTAAAGTCTTCAAAACGGCCTAAGGGAAGTGAGTCACCTTGTGTTACTGAAGAATCTTGCAGGAAGGCAGCTAACATAAAGGATCAAAATGTTTCAGCTGCTGATTGGAAAGATGATCAGAAAGAGACGAAAGAGGAACACAATATCCATTCCAAAGAGAGCTTACCCAACAGAAATGAGGAAACCAAGGATGTGAGCTGGAGAGAAACAGTGGGAGGCTCAAGGAAGGTGGGTGAAGATTCTGAGCATTATGCAGAAGATCCAAAGGTTCTTGAATATCCTGATTCAGAGTTCAATGACTTTGAGAGGGACAAGAGAGAAGAGTGCTTTGCTGCTGGGCAGACCTGGGCTATTTATGATATAACAGAAGGCATGCCTAGGTTCTATGctgtaataaaaaaagttctcTCTCCTGGGTTCAAGGTGGAAATAACATGGTTTGAACCAGATCCTATTGATGAGGATGAACGTAGGTGGGTAGAAGAGGAATTACCGGTTTCTTGTGGGAGGTTTCGTCCTGGAGGAACTGAAATCTCAGATGCTCATTCCATGTTCTCCCATTTGATTTATTGTGAAGCAACTGGCCGTGGTAAAAAAGCTCGTTATAAAGTATATCCTAGGAAGGGAGAAACTTGGGCTCTCTTTAAAAATTGGGATATTAAATGGTACGCAGATGTAGAATCTCATCGAGATAATGAATATGAGTTCGTTGAAATCATGTCAGATTATGTTGGGGGTAATGGTGTATCTGTTGCATACTTGGCTAAGTTGAAAGGCTTTGTAAgtcttttctttcaagttgTAAAGGAAGGTAATAATTCATTCCAAATTCCATCGCGGGAATTATTCAGATTTTCTCACAGGGTTCCATCTTTTAAAATGACTGGTCAGGAAAGAGCAGGTGTTCCAAGAGGATCTTATGAACTTGATCCTGCGTCTTTGCCTTTGAATATTGAAGAGATTGATGCTCCTGAAGGTTTGGAAAGAAAGGTTAGTCCATCTGGTAGTGTGAATATGAGTTCTTCAGATAGATTGAAACCCATGGTGGCATCTGATGGAGATGATTCTAATGGCAGAAGAAGCAATTTTGTGAAGGAGAACAAGGGTTCTGttgttgattttgaagatTGTAGTAGTGCTCATTCAGTTTCAACCCAAGAAGCTGTTGAAATTCCGGATCCTCAGTTCCATGATTTTGATGCTGATCGGTCTCAGAAAAAGTTTCGGATTGGTCAGATTTGGGCATTTTATAGTGATGAGGATGCTATGCCAAAATACTATGGTCATATTGACAGAATTGTGACTAGCCCTGATCTTAATTTGCATATTTCTTGGCTTGCTTCCTGTGATTTACCTAAGAATACTATTAGATgggaaaaagacaaagaaatgcTAGTATCTTGTGGccgatttaaaattttcaggaAAAATTCCAATGTTTACAATAGCTTGCTTTCCATTTCACATCAGGTGCGTGCTGATACTGATGGTAGGAATAATgtattttctatctttcccAGGAAAGGTGAAGTTTGGGCATTATATAAGAACTGGACAGCTGATATGATACGAGATGACTTGTTAAACTGTCAATATGACATAGTCGAAGTTCTTCACGATAGCGATTTGTGGTATGATGTTTTAGTTTTGGAGCGTGTTGGTGGTTATAATTCAGTTTTTAAGGGCAAATCCAACAACGGATCAGTTATTACTTGGAAAATACCCAAGACAGAGTTGCTTAGATTCTCCCATAAAATTCCTGCATTCAAACTGACAGAAAAACATGGCAATGGCAATCTCAGAGGCTTCTGGGAACTTGATCCGCCAGCTCTACCAATGTATTATTTTGGTTCCTCCTG 2960 0.3882 MECNKEEAVRAKSIALMKMESRDFTGAQKLARKAQQLYPDLENIAQMLVVCDVHCSAEQKLFGNEMDWYGILQIEQTANEATIKKQYRKLALLLHPDKNKFAGAEAAFKLIGEASRVLTDRDKRALHDIKRRSSMNKPAVSHRPPQKAYTDLNAGMQNNVRNNFTNIYPQHQQFRHQGQQGPKGEHPEQQQSRQQGQQGPNVERPPHQQSRQPGQQSNGERATFWTVCPFCSVKYQYYTEILNKYVRCQSCGVSFVAINVNVQVTSPATNTNTENSSKEPLKKKGLSSYTVSGNMNGKKKRKKTAESSESSDSIGSTDSEEDVVTDEAGIFSEQNHSTHREENPRRSARQKQQVSYNENRSDDEDNDLKSSKRPKGSESPCVTEESCRKAANIKDQNVSAADWKDDQKETKEEHNIHSKESLPNRNEETKDVSWRETVGGSRKVGEDSEHYAEDPKVLEYPDSEFNDFERDKREECFAAGQTWAIYDITEGMPRFYAVIKKVLSPGFKVEITWFEPDPIDEDERRWVEEELPVSCGRFRPGGTEISDAHSMFSHLIYCEATGRGKKARYKVYPRKGETWALFKNWDIKWYADVESHRDNEYEFVEIMSDYVGGNGVSVAYLAKLKGFVSLFFQVVKEGNNSFQIPSRELFRFSHRVPSFKMTGQERAGVPRGSYELDPASLPLNIEEIDAPEGLERKVSPSGSVNMSSSDRLKPMVASDGDDSNGRRSNFVKENKGSVVDFEDCSSAHSVSTQEAVEIPDPQFHDFDADRSQKKFRIGQIWAFYSDEDAMPKYYGHIDRIVTSPDLNLHISWLASCDLPKNTIRWEKDKEMLVSCGRFKIFRKNSNVYNSLLSISHQVRADTDGRNNVFSIFPRKGEVWALYKNWTADMIRDDLLNCQYDIVEVLHDSDLWYDVLVLERVGGYNSVFKGKSNNGSVITWKIPKTELLRFSHKIPAFKLTEKHGNGNLRGFWELDPPALPMYYFGSS 986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01575 986 Pfam Domain of unknown function (DUF3444) 456 665 IPR024593 -
Bva10g01575 986 Pfam Domain of unknown function (DUF3444) 754 961 IPR024593 -
Bva10g01575 986 PANTHER - 272 984 - -
Bva10g01575 986 Pfam DnaJ domain 67 128 IPR001623 -
Bva10g01575 986 MobiDBLite consensus disorder prediction 173 219 - -
Bva10g01575 986 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 204 272 - -
Bva10g01575 986 MobiDBLite consensus disorder prediction 356 374 - -
Bva10g01575 986 CDD DnaJ 67 120 IPR001623 -
Bva10g01575 986 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Bva10g01575 986 PANTHER - 1 187 - -
Bva10g01575 986 PANTHER - 204 272 - -
Bva10g01575 986 MobiDBLite consensus disorder prediction 691 731 - -
Bva10g01575 986 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 1 187 - -
Bva10g01575 986 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 272 984 - -
Bva10g01575 986 Gene3D DnaJ domain 54 149 IPR036869 -
Bva10g01575 986 MobiDBLite consensus disorder prediction 333 348 - -
Bva10g01575 986 PRINTS DnaJ domain signature 69 87 IPR001623 -
Bva10g01575 986 PRINTS DnaJ domain signature 87 102 IPR001623 -
Bva10g01575 986 PRINTS DnaJ domain signature 103 123 IPR001623 -
Bva10g01575 986 SUPERFAMILY Chaperone J-domain 63 133 IPR036869 -
Bva10g01575 986 MobiDBLite consensus disorder prediction 399 452 - -
Bva10g01575 986 SMART dnaj_3 66 123 IPR001623 -
Bva10g01575 986 MobiDBLite consensus disorder prediction 267 452 - -
Bva10g01575 986 MobiDBLite consensus disorder prediction 126 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01575 Bva-Chr10 10670970 10675820 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01575 4 128 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 44.615 1.52e-22 98.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01575 - - gmx:100795200 1049.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g01575 10 10670970 10675820 Bva10g01575 10 10670970 10675820 ECH