Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01566 ATGGCTGTTGAAGTGTTGTTTTCCAAGTTAACGGCATTGATGACCTCAGATCACGCTTCAGTGGTCTCATTGAACCTATTTGTTGCACTGCTCTGTGCTTGCATCGTAATTGGTCATCTGCTGGAGGAGAATCGTTGGATTAACGAATCCATCACTGCCCTTGTCATTGGTGTCTGCACTGGGTTTTTTATACTGCTTTCAACTGGAGGAAAAAGCTCTCATATAATGGCATTCAGTGAagatcttttctttatttatcttcttccaCCAATCATTTTCAATGCAGGGTTTCAggtgaagaagaaacaattttttcgCAATTTTATGACTATCATGCTCTTTGGTGCAGTTGGCACTTTGATATCATTTGGCATCGTATCTCTAGGTGCTATACACTTTTTCCCGAAATTGGATATCGGATCCCTCAAGATTGGAGATTATCTTGCACTTGGAGCGATATTTTCAGCAACAGATTCGGTCTGTACGTTGCAGGTGCTGAATCAGGATGAGACACCATTGCTATACAGCCTAGTGTTTGGGGAGGGAGTAGTAAATGATGCTACATCTGTAGTGCTCTTGAAAGCAATTCAGAACTTTGACCTCTCACACATCGACTTGACCACTGCTTTAGATCTAATAGGAAactttttatacttatttattgCGAGCACTGTGCTGGGAGTCTTAGCTGGATTGCTTAGCGCTTACATCATTAAGAAGCTTTATTTTGGAAGGCATTCTACCGACCGCGAGGTTGCTCTCATGATACTTATGGCTTACCTTTCATATATGCTTTCTGAACTTTTTGATTTGAGTGCCATTCTCACTGTGTTCTTCTGCGGTATCGTCATGTCTCACTACACATGGCACAATGTGACTGAAAGTTCAAGAGTGACAACAAAGCATGCTTTTGCCACTTTATCATTCATTGCTGAGATCTTCATCTTCCTTTACGTTGGGATGGATGCACTAGATATAGAGAAATGGAGAATTGTATATCCAAGTCCTGGAAAATCAGTTGCGGTCAGTTCATTGCTGTTGGCGCTTATTCTAGTTGGAAGAGCAGCCTTTGTCTTCCCCCTGTCATTTCTAGCCAACTTGCTAAAGAGGTCTTCATCTGACCAGAGAATTGAATTCGAGCAACAAGTAACAATTTGGTGGGCTGGTCTTATGCGTGGAGCTGTTTCCATGGCACTCGCTTATAATCAGTTTACTAGGTCAGGCGACACTAAATCGAGTGAGAATGCCATCATGATCACTAGCACTATCACCGTCGTACTCTTCAGCACTGTGGTGTTTGGGTTGATGACGAAGCCACTTGTGAGGTTATTGCTTCCTTCATCAAAACACATAATTAGCATGCCGTCTCCACCATCTACTCCCAAATCATTCACTGTGCCGCTTCTCAGAAATGGCCATGATGCAGAGTCCAACGGTGGAACCCAAAATGTACGACGACCGAGCAGCTTACGTATGCTCCTAGGTATCCCTTCTGGTGGCGTCCACCATTATTGGCGAAAATTTGATGACGCAGTCATGCGACCTGTCTTCGGTGGGCGGGGTTTTGTACCCTTCGTTCCCGGCTCACCGCTTGAACAGAGTGTTCATCAATGGAGTTA 1619 0.4243 MAVEVLFSKLTALMTSDHASVVSLNLFVALLCACIVIGHLLEENRWINESITALVIGVCTGFFILLSTGGKSSHIMAFSEDLFFIYLLPPIIFNAGFQVKKKQFFRNFMTIMLFGAVGTLISFGIVSLGAIHFFPKLDIGSLKIGDYLALGAIFSATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLLKAIQNFDLSHIDLTTALDLIGNFLYLFIASTVLGVLAGLLSAYIIKKLYFGRHSTDREVALMILMAYLSYMLSELFDLSAILTVFFCGIVMSHYTWHNVTESSRVTTKHAFATLSFIAEIFIFLYVGMDALDIEKWRIVYPSPGKSVAVSSLLLALILVGRAAFVFPLSFLANLLKRSSSDQRIEFEQQVTIWWAGLMRGAVSMALAYNQFTRSGDTKSSENAIMITSTITVVLFSTVVFGLMTKPLVRLLLPSSKHIISMPSPPSTPKSFTVPLLRNGHDAESNGGTQNVRRPSSLRMLLGIPSGGVHHYWRKFDDAVMRPVFGGRGFVPFVPGSPLEQSVHQWS 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01566 539 PANTHER SODIUM/HYDROGEN EXCHANGER 7 538 IPR018422 GO:0006812|GO:0015299|GO:0016021
Bva10g01566 539 Pfam Sodium/hydrogen exchanger family 27 442 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Bva10g01566 539 Gene3D - 12 448 IPR038770 -
Bva10g01566 539 PRINTS Na+/H+ exchanger signature 111 119 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Bva10g01566 539 PRINTS Na+/H+ exchanger signature 82 93 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Bva10g01566 539 PRINTS Na+/H+ exchanger signature 151 161 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Bva10g01566 539 PRINTS Na+/H+ exchanger signature 96 110 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Bva10g01566 539 PANTHER SODIUM/HYDROGEN EXCHANGER 3 7 538 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01566 Bva-Chr10 10602005 10606374 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01566 6 539 Antiporters AT3G05030 73.519 0.0 796
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01566 - - ccaj:109808409 904.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g01566 10 10602005 10606374 Bva10g01566 10 10602005 10606374 ECH