Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01554 ATGGAAGGTCACAGCGACTCTGTTATTCCACTATTTTCTCAAGTTCAACCTTCTTCTGAACCTGCAACCACCATTGCTGAAAGGGGAAGCACCTCCAGGAAGCGTGCTAGACCCCTTGGTGCCAAGCTAGAGAGAGGCCAGAGCCTTCAGCAAGAAAAGGACCGAAGGTTGAAGATGACTCAGAAATTTGCTCAACTCCAATCCTTGGTCCCTGGTAGCTTTCCCAAGGCTACGAGGGAAGTGATTGTAACTGAAGCAATTCGGTACATTATGGAGcttgagaaaaagaataaaatgttgGAAGAGCTTAAGGAGTCAATGAAATCAGTGGGAGGGAGGTTGCTGCTTGCACGTTCTGACAGGAATTCCGACGTCACTGTCACTGTCTCTAACAACGTTGCCTTCTTTGGGGTTCAATCTGTGGCTCGACCTGGTTTAACCACCGACATTATCAGGGTTTTCGACAATCACAAGGCTGAAATTTTGGCTGCAAATGTCTCAGTAAACCATGGACTGTTGACACTGACGATCACAGCTTTTGTTCTTGATGGAAGCATTTCCTCAGAGAAGATTAAGAGAGAGATTCTGGAAATATA 596 0.4463 MEGHSDSVIPLFSQVQPSSEPATTIAERGSTSRKRARPLGAKLERGQSLQQEKDRRLKMTQKFAQLQSLVPGSFPKATREVIVTEAIRYIMELEKKNKMLEELKESMKSVGGRLLLARSDRNSDVTVTVSNNVAFFGVQSVARPGLTTDIIRVFDNHKAEILAANVSVNHGLLTLTITAFVLDGSISSEKIKREILEI 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01554 198 ProSiteProfiles ACT domain profile. 135 198 IPR002912 -
Bva10g01554 198 MobiDBLite consensus disorder prediction 30 52 - -
Bva10g01554 198 MobiDBLite consensus disorder prediction 1 52 - -
Bva10g01554 198 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 43 93 IPR011598 GO:0046983
Bva10g01554 198 Coils Coil 83 110 - -
Bva10g01554 198 Gene3D - 44 111 IPR036638 GO:0046983
Bva10g01554 198 Pfam Helix-loop-helix DNA-binding domain 51 94 IPR011598 GO:0046983
Bva10g01554 198 SMART finulus 49 99 IPR011598 GO:0046983
Bva10g01554 198 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 5 196 - -
Bva10g01554 198 MobiDBLite consensus disorder prediction 9 29 - -
Bva10g01554 198 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 50 109 IPR036638 GO:0046983
Bva10g01554 198 CDD ACT 143 196 - -
Bva10g01554 198 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 5 196 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01554 33 196 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G01260 27.647 2.18e-07 48.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bva10g01554 HLH 5.8e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01554 - - aprc:113874666 184.496
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g01554 10 10544753 10546454 Bva10g01554 10 10544753 10546454 ECH