Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01546 aTGGGTGGGTGTTTTCCTTGTTTTGGATCATCCAACAAGGAGGAAAGCGGAGTGAAGGAAGTTGTCAAGAAGGAATCATTTAAAGAAGGCTCAGTTGCTTTGTCTCACCAGTCCAGCAGAGTTAGTTCtgATAAATCAAAATCCCGCAATGGCACTGATCCTAAGAAGGAACCCATAATTCCAAAAGACGGACCGACAGCCCATATTGCTGCACAAACATTTACTTTCCGAGAACTTGCAGCTGCCACAAAGAATTTTAGGCCAGAATGTTTGTTGGGTGAAGGAGGTTTTGGTCGCGTATACAAAGGCCGTCTGGAGAGCACTGGACAAGTAGTTGCTGTAAAACAGCTTGACCGCAATGGCCTTCAAGGAAATCGCGAATTTCTAGTGGAGGTTCTCATGCTCAGCCTCTTACATCACCCAAATCTTGTTAACTTAATCGGTTATTGTGCTGATGGAGATCAACGGCTGCTTGTTTACGAATTTATGCCTTTGGGGTCTTTGGAGGATCATTTGCATGATCTTCCTCCTGACAAGGAACCCCTGGACTGGAACACAAGGATGAAAATAGCAGCTGGTGCAGCTAAGGGATTGGAATATTTGCATGACAAAGCAAACCCCCCTGTGATATATAGAGACTTAAAATCATCCAACATCCTCCTCGATGAGGGTTTTCATCCCAAGTTATCAGATTTTGGGCTTGCAAAACTAGGTCCTGTTGGTGATAAGACTCATGTATCAACACGAGTCATGGGAACTTATGGTTACTGTGCCCCAGAATATGCTATGACTGGCCAACTAACTCTGAAGTCTGATGTCTACAGTTTTGGAGTTGTCTTCCTTGAGCTTATCACTGGGCGGAAGGCTATCGATAATACACGTGGACCTGGCGAGCATAATCTGGTTGCATGGGCACGACCTCTTTTTAAAGACCGTAGGAAGTTCCCAAAAATGGCTGATCCTTTACTTCAAGGCCGATATCCTATGCGAGGACTCTACCAAGCACTGGCAGTGGCAGCAATGTGTTTGCAGGAACAAGCCGCTACAAGGCCTCTTATTGGGGACGTTGTGACTGCTCTCACGTACCTCGCCTCACAGTCATACGACCCAAATGCAGCCAGTCAGAGCAACAGAGTTGGTCCATCAACTCCTAGGAGCAGGGACGATAGAAGGATCATGGCAGATAGCGTGGACAGCCCTGATCGCGGACGGCTTGGCTCCCCTTCCACCCATAGAAATTCACCTGATTTCAGGAAGAGAGATGGTAGAGATCTAAACGCTGGGACAGACTTAGGCGGGAGTGAAACTGGTGGTGGGTCAGGGAGAAGATGGACATTGGATGATGTAGAAAGGCAGGAATCACAGAGAGACAGCCCTGTAAATACTGGAAGAGCCAGGGAAACTCCAAGGAACCGGGACCTAGACAGAGAGCGTGCAGTTGCAGAAGCCAAAGTATGGGGTGAAAATTGGAGAGATAAAAAGCGGGCAAACGCGATGGGTAGCTTTGATGCTACAAATGAGTA 1523 0.4721 MGGCFPCFGSSNKEESGVKEVVKKESFKEGSVALSHQSSRVSSDKSKSRNGTDPKKEPIIPKDGPTAHIAAQTFTFRELAAATKNFRPECLLGEGGFGRVYKGRLESTGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDLKSSNILLDEGFHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVFLELITGRKAIDNTRGPGEHNLVAWARPLFKDRRKFPKMADPLLQGRYPMRGLYQALAVAAMCLQEQAATRPLIGDVVTALTYLASQSYDPNAASQSNRVGPSTPRSRDDRRIMADSVDSPDRGRLGSPSTHRNSPDFRKRDGRDLNAGTDLGGSETGGGSGRRWTLDDVERQESQRDSPVNTGRARETPRNRDLDRERAVAEAKVWGENWRDKKRANAMGSFDATNE 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01546 507 MobiDBLite consensus disorder prediction 383 398 - -
Bva10g01546 507 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL27 1 501 - -
Bva10g01546 507 CDD STKc_IRAK 92 361 - -
Bva10g01546 507 Pfam Protein kinase domain 91 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g01546 507 SMART serkin_6 86 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g01546 507 PANTHER OS07G0668900 PROTEIN 1 501 - -
Bva10g01546 507 MobiDBLite consensus disorder prediction 42 62 - -
Bva10g01546 507 Gene3D Transferase(Phosphotransferase) domain 1 163 380 - -
Bva10g01546 507 SUPERFAMILY Protein kinase-like (PK-like) 72 379 IPR011009 -
Bva10g01546 507 MobiDBLite consensus disorder prediction 370 479 - -
Bva10g01546 507 MobiDBLite consensus disorder prediction 27 64 - -
Bva10g01546 507 Gene3D Phosphorylase Kinase; domain 1 61 162 - -
Bva10g01546 507 ProSitePatterns Serine/Threonine protein kinases active-site signature. 209 221 IPR008271 GO:0004672|GO:0006468
Bva10g01546 507 ProSiteProfiles Protein kinase domain profile. 86 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g01546 507 ProSitePatterns Protein kinases ATP-binding region signature. 92 115 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01546 Bva-Chr10 10509467 10515859 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01546 66 365 Glycoside Hydrolase AT3G07070 76.000 5.50e-170 484
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Bva10g01546 Pkinase 1.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01546 - - gmx:100814575 892.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g01546 10 10509467 10515859 Bva10g01546 10 10509467 10515859 ECH