Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01541 ATGACCGCAGAACCCAGATTGTTAGCTCGAAGCTTAGAGAGCTGTATAATCCCTTTTTATGATTCTTTGAAAAGATTCCTTATTTCTGATAAATCCATCACTGATACCATTAAAAGCTATGCGCATATTGTTTGCGATGTGCATCGCACATCACATAATGTTCAAGTGTTGCTTGATAATGGAATGCCCGACTTGAAGGTTGGTCTTTTACTTCGTCGATGGCCTCGCGCGATGAGCAAGCAGTCCGGTGAATTCAAAAAGGCAGTGGCTTATCTAAAGGAATTGGGATTCAACCCTTCGAAATCAATTTTCCTTATAGCATTGGTGGCTAAAAGTTCAGGCAAAACAACATGGCAAAAGAAGATTGATTTGTTTAAGAAATGGGGTTGGTCTGAAGAAGCAATTGTTTCAGCATTTAGAAGGTATCCTTGGTGTATGCTAGTGTCTGAAAATAAGCTTATGGTAGTCAAGGATTATTTTGTTACCCGCTTGGGCTGGGACCCTTTGGTGCTTGCCAGATATCCCATTGTTTTCTCGTTTAGTTTGGAGAAAACGATTATCCCAAGGCATTCTGTTCTAGAAGTTCTTCAATCAAGAGGGTTAATTAAAGATGCTCATTTAGTTTCTCCATTCACAATTGGGGAAAAAGCATTCCTGAAGAAATATGTGGATTGTTTCAAGGAGGAAGCTCCTCAGCTATTGAAGTTGTACATAGGAAAACGCAGTCTCTCCCAATA 737 0.3989 MTAEPRLLARSLESCIIPFYDSLKRFLISDKSITDTIKSYAHIVCDVHRTSHNVQVLLDNGMPDLKVGLLLRRWPRAMSKQSGEFKKAVAYLKELGFNPSKSIFLIALVAKSSGKTTWQKKIDLFKKWGWSEEAIVSAFRRYPWCMLVSENKLMVVKDYFVTRLGWDPLVLARYPIVFSFSLEKTIIPRHSVLEVLQSRGLIKDAHLVSPFTIGEKAFLKKYVDCFKEEAPQLLKLYIGKRSLSQ 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01541 245 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 1 240 - -
Bva10g01541 245 Pfam mTERF 12 218 IPR003690 GO:0003690|GO:0006355
Bva10g01541 245 Gene3D Transcription termination factor 3, mitochondrial 1 236 IPR038538 -
Bva10g01541 245 SMART mt_12 1 29 IPR003690 GO:0003690|GO:0006355
Bva10g01541 245 SMART mt_12 168 202 IPR003690 GO:0003690|GO:0006355
Bva10g01541 245 SMART mt_12 136 167 IPR003690 GO:0003690|GO:0006355
Bva10g01541 245 SMART mt_12 68 98 IPR003690 GO:0003690|GO:0006355
Bva10g01541 245 PANTHER CGI-12 PROTEIN-RELATED 1 240 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01541 Bva-Chr10 10475895 10477617 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Bva10g01541 mTERF 3.3e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01541 K15032 - gmx:102663105 217.238