Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01540 ATGTTTAATTCATATCGCAAAGTCCTTCTCTACCTTAAAAATGGTATCTTATCCACTTCCTCGACCCCAAAACTCTGCGTCGTTCTACAGCGCAACCCTTCAACATTTTCTCCGCAATATAGCACCAGCAACTTAGATTCGCAGTCCTTTACGGTAGATTACCTCATAAACAAGTGTGGGTTGTCACAGCAAACTGCCTTATCGGCCACAAAGCGCGTTCAATTTGACAACTCTAAGAAGCCCGATTCAGTGATTGCCTTGTTTAAAAGCCACGGTTTTTCAGACGCCCAAATATCGTTAATCATTAGAAAGCTACCATGTTTGATCACATTCGATCCTGACAAAATCATTCGGCCCAAATTAGAGTTTTTTAAGTCTAAGGGTGCTTCAACTTCCGATCTTATTAAAATGATGACCGCAGAACCCAGATTGTTAGCTCGAAGCTTAGAGAGCTGTTTAATCCCTTTTTATGATTCCTTGAAAAGATTCCTTATTTCTGATGAATGCATCACCGATACCATTAAACGCTATGCGCATATTGTTTGCGATATGAGTCGCACATCACGTAATGTTCAAGTGTTGCTTGATAATGGAATGCCCGACTTGAAGGTTGGTCTTTTACTAAGTCAATGGCCTCGCACGGTGAACATGCAGACGGATGACTTCAAAAGGGCAGTGGATGATCTAAAGGAATTGGGATTCAACCCTTCGAGATCACCTTTCGTTGTAGCATTGGTGGCTAAAAGTAATGGCAAAACAAAATgggaaaggaaaattgaattGTTTAAGAAATGGGGTTGGTCTGAAGAAGTAATTGCTTCAGCATTTACAAGGCGTCCTTGGTGTATGCTAGTATCTGAAGATAAACTCAGGGCAATCAAGGATTATTTCGTTACTCGCTTGGGCTGGGACTCTTTGGTGCTTGCCAGATATCCCATTCTTTTCTCGGTGAGTTTGGAGAAAACAATTATACCAAGGCATTCTGTTCTGGAAGTTCTTCTATCAAAAGGGTTAATTAAAGATGCTCATTCAGTTTCTCTATTCACGGTTGAGGAAAAGTCATTCCGGAAGAGATATGTGGATTGTTTCGAGGAGGAAGCTCCTCGGCTATTGAAGTTGTACGAAGAAAAACGCAATCTCTCCAAATA 1148 0.4051 MFNSYRKVLLYLKNGILSTSSTPKLCVVLQRNPSTFSPQYSTSNLDSQSFTVDYLINKCGLSQQTALSATKRVQFDNSKKPDSVIALFKSHGFSDAQISLIIRKLPCLITFDPDKIIRPKLEFFKSKGASTSDLIKMMTAEPRLLARSLESCLIPFYDSLKRFLISDECITDTIKRYAHIVCDMSRTSRNVQVLLDNGMPDLKVGLLLSQWPRTVNMQTDDFKRAVDDLKELGFNPSRSPFVVALVAKSNGKTKWERKIELFKKWGWSEEVIASAFTRRPWCMLVSEDKLRAIKDYFVTRLGWDSLVLARYPILFSVSLEKTIIPRHSVLEVLLSKGLIKDAHSVSLFTVEEKSFRKRYVDCFEEEAPRLLKLYEEKRNLSK 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01540 382 Pfam mTERF 86 246 IPR003690 GO:0003690|GO:0006355
Bva10g01540 382 Pfam mTERF 184 355 IPR003690 GO:0003690|GO:0006355
Bva10g01540 382 Gene3D Transcription termination factor 3, mitochondrial 153 372 IPR038538 -
Bva10g01540 382 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED 33 379 - -
Bva10g01540 382 SMART mt_12 205 235 IPR003690 GO:0003690|GO:0006355
Bva10g01540 382 SMART mt_12 99 130 IPR003690 GO:0003690|GO:0006355
Bva10g01540 382 SMART mt_12 26 62 IPR003690 GO:0003690|GO:0006355
Bva10g01540 382 SMART mt_12 305 339 IPR003690 GO:0003690|GO:0006355
Bva10g01540 382 SMART mt_12 135 166 IPR003690 GO:0003690|GO:0006355
Bva10g01540 382 SMART mt_12 273 304 IPR003690 GO:0003690|GO:0006355
Bva10g01540 382 PANTHER CGI-12 PROTEIN-RELATED 33 379 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01540 Bva-Chr10 10473037 10474685 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Bva10g01540 mTERF 8.5e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01540 K15032 - gmx:102663105 326.25