Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01536 ATGCTATGGTCTTTTGCGACTGTACCCACCCCCGTATCTCGGAATTTGAGCACAGGTACTTCTGCTGAACACTCTTTTACGGTTTCCTATCTCATAAACAGTTGTGGGTTCTCACCGGAAGATGCTCTCAAAGCTTTCAATTCTAGGAGAGTTCGTTTGAAGACCTCGGAGAAGCCGGATTCAGTTCTCGCTTCCTTCAGAAACCGTGGTTTCTCAGAGTCTGAGATACGCAGTATTATTACAAAGGAACCCAGAATTCTTTTATGCAAATTTGACAAAAGTGTTCTGcccaagtttgaatttttactcTCCAGAGGTGTTTCTTTCTCTGACATAGTCCACATAGTAGTTAGGAGCCCGAAATTCCTTACAAGAAGCGTGGAGAATCATATTATCCCTTCATATGAATTGCTAAAGAGGTTCTTCCAATCTGACAAGGACATAATTTCTTGTATGACATTCTCTATTGCTTTCACTTCTCCCGATCATGTTCCAGTTAATGTGAAATTGTTGCTAGATAAGGGAGTGGCTGAATCGAACATTAAGAACTTGTTTCGTGGAAGGCCTAGTTTATTCCGCTCTTATGACTTAGGGCAGTCGGTGGAAGAAGTAGAGAAATTGACACTCAGAAATTTAGCTTTAGAACACCACTGGTGGCAAAAGGGAGTGTA 671 0.4054 MLWSFATVPTPVSRNLSTGTSAEHSFTVSYLINSCGFSPEDALKAFNSRRVRLKTSEKPDSVLASFRNRGFSESEIRSIITKEPRILLCKFDKSVLPKFEFLLSRGVSFSDIVHIVVRSPKFLTRSVENHIIPSYELLKRFFQSDKDIISCMTFSIAFTSPDHVPVNVKLLLDKGVAESNIKNLFRGRPSLFRSYDLGQSVEEVEKLTLRNLALEHHWWQKGV 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01536 223 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 17 209 - -
Bva10g01536 223 SMART mt_12 113 144 IPR003690 GO:0003690|GO:0006355
Bva10g01536 223 SMART mt_12 77 108 IPR003690 GO:0003690|GO:0006355
Bva10g01536 223 PANTHER CGI-12 PROTEIN-RELATED 17 209 IPR003690 GO:0003690|GO:0006355
Bva10g01536 223 Pfam mTERF 65 202 IPR003690 GO:0003690|GO:0006355
Bva10g01536 223 Gene3D Transcription termination factor 3, mitochondrial 22 208 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01536 Bva-Chr10 10446861 10447532 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Bva10g01536 mTERF 5e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01536 K15032 - gmx:102667698 170.244