Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01535 ATGTTCAATTCCCAACGCCACAAAGCCCTTCTCTGTCTCAAGGGAATCGTCGTAAGAATATGGCCAATCCCAAATCCAAATTGTTATCGTCTTTTGCCCCACGACCCTTCGCCATTTTCTCAGAAATACAGCACAAACACTTTCGCTAATCGGTCTTTTAGGGTTTCCTACCTCATAGACAATTTCGGCTTCTCACCGGAAGCTGCTTTGACAGCTTGCAAGGTAGCTCGTTTTAAGAGCTTAGAAAAGCCGGATTCAGTTCTCTCTTTCCTCAGAAACCGCGGTTTCTCTGACTCTCAGATAAACGTTATCATCAGAAAGGAACCGTGGCTGCTTTCATGCGACCCCGACAAAAGGCTTATGcccaagtttgaatttttacaCTCTAAAGGTGTATCTAGCTCTGACATCGTCCGCATGGTCAATAGAAGCCCGAGATTCCTGCAAAAGAGCTTGGAGAATCAGATAATCCCCTCGTACGAATTGCTTGAAACTTTCTTACAATCTGATGAGGAGATCATTGCTTGTATAAAATACCATCCGTCATTATTGTATCAGAATGTGATGCCAACCAATGTCCAAATTTTGGTCGATAATGGAGTAGTGGGCTTAAACGTTACTAGATTGCTTCGTCGGTGGCCTAAAATTCTGCTAGAAAGTGACTTAGACAAGACGGTGAAGGAATTAAAGGATTTGGGATTTAATCCTTCGAAAGTAGTTTTTGTCTTAGCGTTGCTTGCCAAAAGGAGTGTATCGAAATCCCAGTGGGATTCAAAAGTTGACTCGTTTAAGCGGTGGGGTTGGTCTGAGGAAGCAGTTTTGCAAGCATTTAAGAACCATCCGGGCTGTATGTTAGTCTCCAAGGATAAAATTGATGCTGTAATGAGATTTTGGGTTAACCAGTTAGGTTGGGAATCTTTGATGCTGGTCAGAAAACCAGAAATTTTGGCATACAGTTTAGCAAAAAAGATCATTCCAAGGGCTTCGGTTTTGCAGCATCTTCTGTTAAAAGGCTTGATAAACCAAAATGGCTTACTCTCACCATTTGGTCCTGCTGAAAATTTGTTCCTGCAAAAATATGTGATGCGTTTTGAGAAGGAAAGATCGAAGCTATTAGAGGTGtatgaggagaaaaagaaactttcaAATAACAGGGAGAACAGTGGGGTATG 1172 0.4078 MFNSQRHKALLCLKGIVVRIWPIPNPNCYRLLPHDPSPFSQKYSTNTFANRSFRVSYLIDNFGFSPEAALTACKVARFKSLEKPDSVLSFLRNRGFSDSQINVIIRKEPWLLSCDPDKRLMPKFEFLHSKGVSSSDIVRMVNRSPRFLQKSLENQIIPSYELLETFLQSDEEIIACIKYHPSLLYQNVMPTNVQILVDNGVVGLNVTRLLRRWPKILLESDLDKTVKELKDLGFNPSKVVFVLALLAKRSVSKSQWDSKVDSFKRWGWSEEAVLQAFKNHPGCMLVSKDKIDAVMRFWVNQLGWESLMLVRKPEILAYSLAKKIIPRASVLQHLLLKGLINQNGLLSPFGPAENLFLQKYVMRFEKERSKLLEVYEEKKKLSNNRENSGV 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01535 390 Pfam mTERF 88 185 IPR003690 GO:0003690|GO:0006355
Bva10g01535 390 Pfam mTERF 187 340 IPR003690 GO:0003690|GO:0006355
Bva10g01535 390 PANTHER CGI-12 PROTEIN-RELATED 33 382 IPR003690 GO:0003690|GO:0006355
Bva10g01535 390 SMART mt_12 274 305 IPR003690 GO:0003690|GO:0006355
Bva10g01535 390 SMART mt_12 207 235 IPR003690 GO:0003690|GO:0006355
Bva10g01535 390 SMART mt_12 102 133 IPR003690 GO:0003690|GO:0006355
Bva10g01535 390 SMART mt_12 138 169 IPR003690 GO:0003690|GO:0006355
Bva10g01535 390 SMART mt_12 306 337 IPR003690 GO:0003690|GO:0006355
Bva10g01535 390 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 33 382 - -
Bva10g01535 390 Gene3D Transcription termination factor 3, mitochondrial 148 368 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01535 Bva-Chr10 10444558 10446013 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Bva10g01535 mTERF 1e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01535 K15032 - gmx:102663414 352.058