Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01534 ATGTTCAATTCCCGGCACCAGAAAGTTCTTCTCTACCTCAAGGGTATCATAAGAACATGGCCAACGCCGAACTGTTATCGCCTGCAACACAATCTATCACCGTTTTTTCTGAAATACAGCACAAGCACATCCGACGAACGATCTTTTGTGGTATCCTACCTCGTAAACAATTTTGGGTTCTCACCGGAAGCTGCTCTGAAAGCCTCCAAGCGACTTCATTTTGAGACCTCTACGAAACCGGATTCAGTTTTGACCTTCTTCAGAGACCGCGGTTTCTCGAATTCTCAGATTCGAAATGTCATTCAAAGAGAACCGTCTCTGCTTTCAtgcaatgttgaccgaagactTTTGCCcaagtttgaatttcttcagTCTATAGGTGCTTCTAGCTCAGACATTGTGGAAATTGTGACTAAAAATCCGACATTTCTACGTTCAAGCTTGAAGAATCATATCATTCCTTCATTTGAATTGGTGAGAAGATTCCTCAAAACTGATAAGAAGgcaatttcttgtataaaaGCCTCTCCAACTTACATTTTTGATTATCGTGTGACACTTTCTGTGGAATTGTTGCTTGATAAAGGAACGACTAACTCAAACATTGCTAGATTGCTTCGTTCGAGGCCTGGTATATTGCTCTCGAAAGACTTGATGAAGGTCGTGGAGCAAGTAGAGGAACTGGGAATTGATCCTTCCTATCAGTGTTTTTGTTGGGCATTGATGGCTAAAACTATTAGCAAAGCCAAGTGGGATGCTAAAATTGATACCTTTAAGAGATGGGGCTGGTCTGAAGAAACgactttgaaaatatttagGTGGCGTCCAGTCTTGATGTTGTCATCTGTGGATAAAATTAATGCAGTAATGAATCTTTGGGTCAACCAGTTAGGTTGGAATTCTTTATCCCTTGTCAAAGGACCAGTCATTATCCAACTTAGTTTGGAGAAAAGGATTATTCCAAGGGCTGCAGTTGTGCAGTTTCTTCTCTCAAAAGGTTTGAGAAGCAAGAATGCTAGCTTAGTTACACCATTTTATTTAACTGAGAAGATGTTCCTGGAAAAGTATGTGAAATGTTTTGAGGAAAGTTCTCAATTATTAGAGCTATACgaggaaaaaatgaaatcttCCAGATG 1136 0.375 MFNSRHQKVLLYLKGIIRTWPTPNCYRLQHNLSPFFLKYSTSTSDERSFVVSYLVNNFGFSPEAALKASKRLHFETSTKPDSVLTFFRDRGFSNSQIRNVIQREPSLLSCNVDRRLLPKFEFLQSIGASSSDIVEIVTKNPTFLRSSLKNHIIPSFELVRRFLKTDKKAISCIKASPTYIFDYRVTLSVELLLDKGTTNSNIARLLRSRPGILLSKDLMKVVEQVEELGIDPSYQCFCWALMAKTISKAKWDAKIDTFKRWGWSEETTLKIFRWRPVLMLSSVDKINAVMNLWVNQLGWNSLSLVKGPVIIQLSLEKRIIPRAAVVQFLLSKGLRSKNASLVTPFYLTEKMFLEKYVKCFEESSQLLELYEEKMKSSR 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01534 378 Pfam mTERF 246 352 IPR003690 GO:0003690|GO:0006355
Bva10g01534 378 Pfam mTERF 84 241 IPR003690 GO:0003690|GO:0006355
Bva10g01534 378 PANTHER CGI-12 PROTEIN-RELATED 26 376 IPR003690 GO:0003690|GO:0006355
Bva10g01534 378 SMART mt_12 269 300 IPR003690 GO:0003690|GO:0006355
Bva10g01534 378 SMART mt_12 203 231 IPR003690 GO:0003690|GO:0006355
Bva10g01534 378 SMART mt_12 134 165 IPR003690 GO:0003690|GO:0006355
Bva10g01534 378 SMART mt_12 301 335 IPR003690 GO:0003690|GO:0006355
Bva10g01534 378 SMART mt_12 98 129 IPR003690 GO:0003690|GO:0006355
Bva10g01534 378 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 26 376 - -
Bva10g01534 378 Gene3D Transcription termination factor 3, mitochondrial 46 183 IPR038538 -
Bva10g01534 378 Gene3D Transcription termination factor 3, mitochondrial 184 366 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01534 Bva-Chr10 10440317 10441859 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Bva10g01534 mTERF 3.7e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01534 K15032 - gmx:102667698 358.607