Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01533 ATGTTGTGCTTGCTGTGCCCCAAAACCCTTGGATACCTAGCAAGATCTGCAACCCGGCCGTTTTCTCCGAGTTTCAGCACTAGCACTGCCGATAAAACGTCCTTTACAGTATCCTACCTCATTGACAAAGGTTTTTCACAAGAAGCTGCTTTGGAAATCTCTAAGCGAGCTCGTTTTGGGACCTCGACAAAGCCGGATTCAGTTCTCACCCTTCTCAGAAACAGCGGTCTCACAGACTCTCAGCTGTACGATGTCATCAGAAAGAGACCATGGCTGCTCTCATGCGACCCCAACAAAAACATTCAGcccaagtttgaatttttactcTCTAAAGGTGCTTCTAGGTCTGACATTGTTCACATGGTGACTACATCCCCGAGATTCCTTAAAAGAAGCTTGAAGAATCACATAATCCCCCAATATGAATTGGTGAAAAAAATCGTCCAAACTGATAAGGCCGCCATACTTTGTTTCAAGCGTTATGCCAAATTACTTTCTTTCAGTCATACTTGTGCGGCCCATAATATCGATTTGTTGCTTGAAAATGGGGTGACCGAGTCAGTCATTGCTAGATTGATTCTTTTACGCACCAGTTTGCTAGAGATATCTTCTAGTGAATTGAAGAAATCGATAGTGGAAATAAAGGATTTGGGAATTGTTCCTTCGAAAGTGCAATTTCTTTGGGCATTGATAGCTAAACTGAGTATGAAAGAATCCAAATGGGATGCCAAAGTTGATGCTTTTAAGGAGTGGGGTTGGCCTGAAGAATTGGTTTTGGAAGCCTTTAAGAGAGATCCGCTCATTATGTTGGCATCCTTGAATAGAATTAATGCAGTGATGAGTTTTTGGGTCAACGAATTAGGCTGGAATTCTTTGGTGCTTGCTGAAGGACCACGAGTTTTCAGATACAGTtttgagaaaagaattatTCCAAGGGCTTCAGTTGTGCACTTTCTTCTCTCGAAAGGTTTGATAAGCGAGAAGGCTAACTTATTTACACCATTAGATCTTACTGAAGAGCTGTTCCTTAGAAAGTATGTGGAATGTTTTCGGAAGGAAAGTTCTCAAATATTAAAGCTATACAAGAAAAAGTTGAGTCTTACAGATAAGAAGGAAAATGGTAGCATGTA 1130 0.4018 MLCLLCPKTLGYLARSATRPFSPSFSTSTADKTSFTVSYLIDKGFSQEAALEISKRARFGTSTKPDSVLTLLRNSGLTDSQLYDVIRKRPWLLSCDPNKNIQPKFEFLLSKGASRSDIVHMVTTSPRFLKRSLKNHIIPQYELVKKIVQTDKAAILCFKRYAKLLSFSHTCAAHNIDLLLENGVTESVIARLILLRTSLLEISSSELKKSIVEIKDLGIVPSKVQFLWALIAKLSMKESKWDAKVDAFKEWGWPEELVLEAFKRDPLIMLASLNRINAVMSFWVNELGWNSLVLAEGPRVFRYSFEKRIIPRASVVHFLLSKGLISEKANLFTPLDLTEELFLRKYVECFRKESSQILKLYKKKLSLTDKKENGSM 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01533 376 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 27 369 - -
Bva10g01533 376 Gene3D Transcription termination factor 3, mitochondrial 157 359 IPR038538 -
Bva10g01533 376 PANTHER CGI-12 PROTEIN-RELATED 27 369 IPR003690 GO:0003690|GO:0006355
Bva10g01533 376 Pfam mTERF 199 342 IPR003690 GO:0003690|GO:0006355
Bva10g01533 376 Pfam mTERF 69 274 IPR003690 GO:0003690|GO:0006355
Bva10g01533 376 SMART mt_12 155 185 IPR003690 GO:0003690|GO:0006355
Bva10g01533 376 SMART mt_12 291 325 IPR003690 GO:0003690|GO:0006355
Bva10g01533 376 SMART mt_12 190 220 IPR003690 GO:0003690|GO:0006355
Bva10g01533 376 SMART mt_12 119 150 IPR003690 GO:0003690|GO:0006355
Bva10g01533 376 SMART mt_12 83 114 IPR003690 GO:0003690|GO:0006355
Bva10g01533 376 SMART mt_12 259 290 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01533 Bva-Chr10 10437056 10438422 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Bva10g01533 mTERF 1.4e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01533 K15032 - gmx:102666739 303.908