Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01527 ATGGAGGACAACATTGGAGGCAGTTCCTCCAACGACAATGGTATCAAAGAACAAGATCGGTTGCTGCCAATTGCCAATGTCGGTCGGATCATGAAGCAGATTCTTCCCCAGAACGCGAAAGTCTCGAAGGAAGCGAAGGAGACAATGCAAGAATGTGTGTCAGAGTTCATAAGCTTCGTCACCAGCGAGGCGTCGGAGAAGTGCCGGAAGGAGAGGAGGAAGACAGTGAACGGAGATGACATTTGCTGGGCTCTGGGAGCATTAGGGTTCGACGACTATGCCGAGCCACTGCGGAGGTATTTGCATAGATATAGAGAATTAGAGGTAGACAAATCTAACCAACAAGATAGAGCTAATAGCCCAGAAGAAAAGGATGAGCTTTCCTCCTATAAGATGCCCACTAGAGGATTTAGGCAGTA 419 0.4821 MEDNIGGSSSNDNGIKEQDRLLPIANVGRIMKQILPQNAKVSKEAKETMQECVSEFISFVTSEASEKCRKERRKTVNGDDICWALGALGFDDYAEPLRRYLHRYRELEVDKSNQQDRANSPEEKDELSSYKMPTRGFRQ 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01527 139 MobiDBLite consensus disorder prediction 108 139 - -
Bva10g01527 139 Gene3D Histone, subunit A 8 136 IPR009072 GO:0046982
Bva10g01527 139 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y PROTEIN 1 126 - -
Bva10g01527 139 SUPERFAMILY Histone-fold 18 122 IPR009072 GO:0046982
Bva10g01527 139 PRINTS CCAAT-binding transcription factor subunit A signature 49 67 - -
Bva10g01527 139 PRINTS CCAAT-binding transcription factor subunit A signature 87 105 - -
Bva10g01527 139 PRINTS CCAAT-binding transcription factor subunit A signature 68 86 - -
Bva10g01527 139 MobiDBLite consensus disorder prediction 108 131 - -
Bva10g01527 139 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 21 85 IPR003958 -
Bva10g01527 139 ProSitePatterns NF-YB/HAP3 subunit signature. 52 68 IPR003956 GO:0005634|GO:0006355|GO:0043565
Bva10g01527 139 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 1 126 IPR027113 GO:0001228|GO:0006355|GO:0016602
Bva10g01527 139 Coils Coil 97 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01527 Bva-Chr10 10392387 10392806 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01527 15 118 CCAAT-HAP3 Transcription Factor Family AT2G47810 77.885 1.40e-58 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Bva10g01527 CBFD_NFYB_HMF 1e-27 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01527 K08065 - gmx:100794513 208.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g01527 10 10392387 10392806 Bva10g01527 10 10392387 10392806 ECH