Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01516 ATGGAAAATTCTCTCTATATTCAGCAAAGACCCTTCTCTACCACCCAATCCCTCATCTGCATTCTCAATCTGTTGGCTCTGGGTAGCTCTAGAAGATTTATTGGTAGCATGCTTAGTCCTGAAGGAGAACTGAAAATAAGTTTTGGCTATCAATGCAATAATGGAAGAAACATTCTTTGTAAGGTCGCCAACGGCTTTGAAATCCTGCCTGCAGTGCACAGAACAAGCAGTTTTACTTGCTTGTCTGGTGCGGCCTTAAGTGCTAATGCAACATTAGCAAATACAAATATCTGCAATGGGGTGATAGGAGAAGAAATCCTTCCCACTTGGGACTCCCCTAACTCATTCCGTAAGGTATCCTCTTCGCCAAGTCTTTCAAGGCTGGATATATTGTCATCTTCCCTCCAAGGTAGCTTGTCAAACTTAAGCTGCAGTCCGTGTACTCCAAGTGAAATGCCTGAATATGACCCTTGTTCATTAAAATCCATGAATGCCCCTTCCAGAAATGAAGGCTTTCTTAATGCTGTGGAAGTGCAAGTAGCAGGAGGAGCTGCTGGTGAAGACAGAGTTCAAGCAGTTTGCTCTGAAGAAAATGGATGGCTCTTTTGTGCAATTTATGATGGCTTTAACGGGAGAGATGCAGCTGACTTTCTGGCTGGTACCTTGTATGACACCATCATATCTTGTTCTAATATGTTAGATTGGGAATTGGAGGCAGATTCCATTCAAACTTCCAACAATATTGGTTCAGACAGATTTTTCCAAGATGAGTTGGATGATAGAGAAGAACGATCTCTTTCAAGATTTGGGGGATACAGCAATTCTCATATTGGCTGTATTGTCAAGGGTAGTCCATCCACTAAGGTAGAAGCatcatatatatctttttcacAAGGAGTTCTTGATAGCCTCCAACGTGCCCTTAACCAAGTTGAGAATGAGTTCCTATACATGGTCGAGCAGGAAATGGAGGAACGCCCAGATTTAGTTTCTATTGGTTCTTGTGTTTTACTTGTACTACTTCATGGGAATCATTTGTATACACTTAATCTTGGTGACAGTAGAGCAGTATTGGCAACATGCAGTAGGGGTGATAAAATTGATGGAAAGGAGAGACTCAAAGCTATTCAGCTTACAGAGAGTCATACTGTTGAAAATGAAGCTGAAAGAGCCCGACTTCTGGCTGAACATCCCGATGATCCTATGCCCATTGTAGCGGGAAAAGTGAAAGGAAAACTGAAGGTTACTCGTGCATTCGGAGTTGGTTACTTGAAAAAGAAAAATCTGAATGATGCATTGATGGGAATCCTTCGAGTTCGCGATCTCAAAAGCCCTCCATATGTTTCCACTCAACCATCAATGAATGTGCATAAGATCTCAAATTTGGATCAATTTGTAATTGTAGCAAGCGATGGCTTATTTGACTTCTTCAGCAATGATGAGGCAGTGAAGCTTGTAGAGTCTTATATCTTGAGCAATCCTTCTGGTGATCCTGCCAAGTTTCTCATTGAGAAGCTTGTAGCTAGAGCAGCTAATCGTGCAGGTTTCAGCACAGAAGAGTTGATGAACATTCCTGCTGGGAGGAGGAGGAATTATCATGATGATGTTACTGTAATTGTGATCATTCTTGGGATGAATCAGCGAACTTCAAAGGCATCAActtgcatttg 1670 0.4126 MENSLYIQQRPFSTTQSLICILNLLALGSSRRFIGSMLSPEGELKISFGYQCNNGRNILCKVANGFEILPAVHRTSSFTCLSGAALSANATLANTNICNGVIGEEILPTWDSPNSFRKVSSSPSLSRLDILSSSLQGSLSNLSCSPCTPSEMPEYDPCSLKSMNAPSRNEGFLNAVEVQVAGGAAGEDRVQAVCSEENGWLFCAIYDGFNGRDAADFLAGTLYDTIISCSNMLDWELEADSIQTSNNIGSDRFFQDELDDREERSLSRFGGYSNSHIGCIVKGSPSTKVEASYISFSQGVLDSLQRALNQVENEFLYMVEQEMEERPDLVSIGSCVLLVLLHGNHLYTLNLGDSRAVLATCSRGDKIDGKERLKAIQLTESHTVENEAERARLLAEHPDDPMPIVAGKVKGKLKVTRAFGVGYLKKKNLNDALMGILRVRDLKSPPYVSTQPSMNVHKISNLDQFVIVASDGLFDFFSNDEAVKLVESYILSNPSGDPAKFLIEKLVARAANRAGFSTEELMNIPAGRRRNYHDDVTVIVIILGMNQRTSKASTCI 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01516 556 CDD PP2Cc 185 543 IPR001932 -
Bva10g01516 556 Pfam Protein phosphatase 2C 276 510 IPR001932 -
Bva10g01516 556 PANTHER PROTEIN PHOSPHATASE 2C 36 555 IPR015655 GO:0004722|GO:0006470
Bva10g01516 556 SMART PP2C_4 163 541 IPR001932 -
Bva10g01516 556 SUPERFAMILY PP2C-like 185 544 IPR036457 -
Bva10g01516 556 Gene3D - 158 552 IPR036457 -
Bva10g01516 556 PANTHER PROTEIN PHOSPHATASE 2C 40-RELATED 36 555 - -
Bva10g01516 556 ProSiteProfiles PPM-type phosphatase domain profile. 172 543 IPR001932 -
Bva10g01516 556 Coils Coil 294 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01516 Bva-Chr10 10330045 10333323 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01516 40 556 PP2C-type Phosphatase Gene Family AT3G16560 63.289 0.0 604
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01516 - - gmx:100808304 772.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g01516 10 10330045 10333323 Bva10g01516 10 10330045 10333323 ECH