Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01512 ATGGAGGATTCAGTGAAGCAAAAGCTAAAGCAACGGGAGTTTACTTTGGCGTCAGTCGCTGAGCTATCTTCTGCTGCTTCCGCTTCGCGAGGAATTGCTCGTTTCAGTTACAACGGTCCTCTCCCGGAGCTGCATATAAACCAGGAATCTCAGCAGATTACCCTCAGTGTTGATCTTCCAGCTGCTCAGCTATTCAAGTTAGGCCCAGTTCAATCGGTTTGCATGGTCGATGGATCTGATAAGGGTAAAGAGACGACATATTCAAGGGGACTCGCTATCCAGTTTAAAAATGAGGAGGAGAGCAGGGCCTTCCATTTTGTATTCCAGCAATGGAAGAAGGAAGCCAATGTTCAAGGTGGAGACTTACCAAATGGTACTATTTCAACTTCTAAAAGCAAGTTTGATGAAAAGATAGAGTCTTCTTCTGCAAAAATGTATTTCCATTATTATGGACAACTTCTGCATCAGCAAAATATGTTGCAGGATTATGTTAGAACAGGAACCTATTATGCTGCAGTTATTGAGAATCGTGCTGATTTCGTGGGTCGTGTGGTAGTTGATGTTGGTGCTGGTAGTGgtattttgtcattatttgCTGCTCAGGCTGGTGCAAAGCATGTTTATGCTGTGGAAGCATCTGAAATGGCAGAATATGCACGGAAACTTATAGCTGGGAACCCGACATTGGGTCAACGAATAACAGTTATTAAAGGCAAAGTTGAGGATGCTGTATTGCCTGAGAAAGCGGATATTCTGATATCTGAGCCTATGGGCACCCTGTTAATCAATGAAAGAATGCTGGAGTCTTATGTTATTGCTAGGGATAGGTTTCTAATCCCCAGTGGGAAGATGTTCCCGACATTAGGAAGGATTCATATGGCACCTTTCAGTGATGAGTATTTGTTTGTTGAAATTGCTAATAAGGCCCTCTTTTGGCAGCAGCAGAACTATTATGGTGTTGATTTGACACCCTTATATGGGACTGCATTTGGAGGATACTTTTCTCAGCCCGTAGTGGATGCCTTCGATCCAAGATTGTTGATAGCTCCTCCAGCGTTCCATGTGATAGACTTCAGTAAAGTAAAGGAAGAAGATCTGTATGAAATTGATATTCCTTTGAGATTCATAGCCTCTGTGGGTGCCAGAGTACATGGATTGGCCTGTTGGTTTGATGTACTGTTCAACGGAAGTACTGTTCAAAGGTGGCTCACCACTGCCCCAGGTGCGCCAACGACCCACTGGTACCAGTTACGCTGTGTTCTCTCCCAGCCAATCTACGTCATGGCAGGACAAGAAATTACTGGGAGGCTTCACATGATTGCCCACAATGCACAGAGCTATACAATAAATCTAACATTGTCAGCTAAAATGTGGGGTCCCGGTGCTGAACAAGGGGGAATTCTGCAAACATCATCGGATAAATTTGATCTCAAAGAACCCTACTACAGAATGTCTCAACCGCAAGCTTATCCATTAGCCCAAGACCAGCAACCACAACCTCTCATAAACACACAGGACATTCCCATTCCATCTCAggatttggatgattctgaaCTAATGCAGGAGCCTTCTCCTAATTCATGTGCTCAGATTGATTCGTTGAtgcaaaatatttg 1616 0.4288 MEDSVKQKLKQREFTLASVAELSSAASASRGIARFSYNGPLPELHINQESQQITLSVDLPAAQLFKLGPVQSVCMVDGSDKGKETTYSRGLAIQFKNEEESRAFHFVFQQWKKEANVQGGDLPNGTISTSKSKFDEKIESSSAKMYFHYYGQLLHQQNMLQDYVRTGTYYAAVIENRADFVGRVVVDVGAGSGILSLFAAQAGAKHVYAVEASEMAEYARKLIAGNPTLGQRITVIKGKVEDAVLPEKADILISEPMGTLLINERMLESYVIARDRFLIPSGKMFPTLGRIHMAPFSDEYLFVEIANKALFWQQQNYYGVDLTPLYGTAFGGYFSQPVVDAFDPRLLIAPPAFHVIDFSKVKEEDLYEIDIPLRFIASVGARVHGLACWFDVLFNGSTVQRWLTTAPGAPTTHWYQLRCVLSQPIYVMAGQEITGRLHMIAHNAQSYTINLTLSAKMWGPGAEQGGILQTSSDKFDLKEPYYRMSQPQAYPLAQDQQPQPLINTQDIPIPSQDLDDSELMQEPSPNSCAQIDSLMQNI 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01512 538 CDD AdoMet_MTases 185 256 - -
Bva10g01512 538 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 139 454 IPR025799 GO:0016274|GO:0018216
Bva10g01512 538 PANTHER HISTONE-ARGININE METHYLTRANSFERASE 1.4-RELATED 1 494 - -
Bva10g01512 538 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 149 460 IPR029063 -
Bva10g01512 538 Gene3D - 288 496 - -
Bva10g01512 538 Pfam Ribosomal protein L11 methyltransferase (PrmA) 182 260 - -
Bva10g01512 538 MobiDBLite consensus disorder prediction 501 527 - -
Bva10g01512 538 Gene3D Vaccinia Virus protein VP39 125 286 IPR029063 -
Bva10g01512 538 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 1 494 IPR025799 GO:0016274|GO:0018216
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01512 Bva-Chr10 10310811 10316852 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01512 47 435 C2H2 Transcription Factor Family AT3G12270 28.972 1.28e-36 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01512 K05931 - gmx:100780736 896.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g01512 10 10310811 10316852 Bva10g01512 10 10310811 10316852 ECH