Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01509 ATGCACATGGAACCTCAATTCCCTAAACCTCGATCTTACGGACCCCAAATGAAAATGACGATACCGCCATCTCAACTCTCCGACAACGACCGGAGCACCACCGAATTGCGCGCTCTTGATTGCAACCTCACTTCTCTTTGCGATCATATCCAAATGGAAGGTTTCAATTCCGGCGCATTCTCCGATATCGTGGTCCATGCAATGGATTCTGCTTATCATCTCCATCGCCTTATTCTATCTCGAAGCTCTTACTTCAGGAACATGCTTCATGGGCCTTGGAAGGAAGCTAGTGCTCCTATTGTCACCTTACATGTTGATGATAAGAATGTCAATGACGAGGCAATTGCAATGGCCTTGGCTTATCTATATGGACACCATCCTAAGCTCAACGACAATAATGCATTTCGTGTTCTAGCTGCTGCTTCCTTTCTTGATCTCCAGGACTTATGTGCAATATGTACAGACTTTATTATATCTGAGCTGTGGACGTCAAACTTCTTGACATATCAGGTATTTGCTGAGAACCAAGATTATGGAATTCATGGGGAGCGTGTTAGAAATGCATGTTGGGGCTACCTATGTCAAAGTGGTGGCATGGAATTGAAAGAGGTGCTTCCCAAACTTTCCTCTCAAACGTTGCATTTATTATTGACCTCTAATGAGCTGTGGATACCAAGTGAAGAAAAACGGTTTGAACTAGCATTGCACACATTCCTGGAAAAAGGTGCTCGCTGCAAAGATGAACATCCTGAGCAAGGAAGTTCTGGTTCAGAAACTGAAGCCAATATCCATTCTGATTCTGCCAAGGCAAAGGGAAAAAGTGTAACTGATAGCTGCATGGCTAAGGGGTTGGAAACTGATCTAGGGCATTTGAGTCTCAAAAGTGATCTAAAGGAATCTAATGTTCATAATCTTCTGGTTGAGCTAGGTGACTGTGTGTCAGATTTCAGCAATGGGGATTCTGATTCTAATCAAGAGGCGCTACAAGTTTCATATTCTACTTCATCAAACTTGGAGCCAAGATACCCTTGCAACATGGAAGGGCCTTCATCATTGGGTAATTCGCTGTCTGATACAGATGGGGTTAGAACGTCATGTTCCTATATTGAGATGCCTCTCAGTGCTGGAAGTACTGGAGTCAGAACCACTGAAGTGGCAATTGAAGGGCCATCAGGGGAAGGGTCTTGTTATCGTATGGATAACAATAGTTGGCTAATGAGGGATCAACCCAACTGCTTTTCCTCAAATTCTTCCAGTAATGAGCTCAGATCAAGTGATTGGGGAAGATATGCCACACCTCCTTTTTCATGGGGTGGCAGGGTTGTTGGCAAAAGACATCTTAAAGCTCACTCGAAAGCAAACTATGGGGCTCATGGGGATGAATATGATGcctttgttaatatatttgaaggGGGTTCTCTTTTGTATTGCAATATGTCTTTTGAGGCACTTTTAAATGTCAGAAAGCAACTTGAAGAATTAGGATTCCCTTGCAAAGCTGTAAATGATGGTCTTTGGCTTCAGATGCTTCTAAGCCAAAGGGTGCAAGAAATTGCCGCTGATACATGCAAAAGTTGTTGCCTTATGAGTATGGCGTGCACCTGTCGCCAGCCATTTGCATTTTCTCATGGGGTTACCACCGCTGGTTATTACATTCAAGAACACAATCAGAGTAATATGCCTGGGAATGTGGgaaatatatatgttgctGAGTCTTCTCAAGGTGAAGGAAACAGTGCTTTTAGACCAGTCCGAGTACATGTTAGGGGTACCATTGATGGGCTTGCAGGTATTGGTCGTGGAACTACATTTGTGCCAGCAGCTACTTCACCTCCTACACGTTTTGTCTTTTCTCGTGTACCATTTGGTGTTGGCAACAGAAATTATGCACAATCTGCAGCTAATGATGACTCAGAGTTACGAGCTGACCACAATGGAGACCTGTCTGGAGATGGGTTGACAGCTTTGGTTGGGCTGAGCCAGGGGGGAAGTAATGTAATGAATGTGCATGGAGAATTAACACAAAGGGGATACGAGATGGATATGCAAAGTAGAACAACATCTGGAACTACTGCTGGAGGCCAAAGTACTGGCGGTATTCCCATGCAGATGTTAGAGACTCCAGAACATACTATTGGATTAGAATGGGAAAATCCTAGCAGTTCATCTATATCATTGGATTTGAAAACACCTTTAAGCCATTTTCCACCTTTTCGCTTTGGAGTGCAATTTGAGGATGTGCACAGGCTTGGTGATGGGCAGGTCAAGCATTCTCCAGAAGTATTTTATGCTGGTTCTTTATGGAAGGTCAGTGTGCAGGCTTTTAACGATGAAGATCCCCAGGGACGCCGAACTCTTGGATTGTTTCTTCATCGAAGGAAGGCAGAGATAACTGATTCGCATAGAAAGGTGCATATGTATGTTGACACACGTGAAAAGGTGACTGCTCGCTATCAGTTGATTTGTCCATCAAAGAGGGAAGTGATGGTTTTTGGAAGCTTTAAACAAACAGGGACTCTTCTACCTAAAGCTCCCAAAGGATGGGGTTGGCGAACTGCTCTGTTATTTGATGAGCTTGCAGATCTTCTCCAAAATGGGGCCTTGCGGATCATTGCTGTTGTGCAGCttgtttg 2633 0.4341 MHMEPQFPKPRSYGPQMKMTIPPSQLSDNDRSTTELRALDCNLTSLCDHIQMEGFNSGAFSDIVVHAMDSAYHLHRLILSRSSYFRNMLHGPWKEASAPIVTLHVDDKNVNDEAIAMALAYLYGHHPKLNDNNAFRVLAAASFLDLQDLCAICTDFIISELWTSNFLTYQVFAENQDYGIHGERVRNACWGYLCQSGGMELKEVLPKLSSQTLHLLLTSNELWIPSEEKRFELALHTFLEKGARCKDEHPEQGSSGSETEANIHSDSAKAKGKSVTDSCMAKGLETDLGHLSLKSDLKESNVHNLLVELGDCVSDFSNGDSDSNQEALQVSYSTSSNLEPRYPCNMEGPSSLGNSLSDTDGVRTSCSYIEMPLSAGSTGVRTTEVAIEGPSGEGSCYRMDNNSWLMRDQPNCFSSNSSSNELRSSDWGRYATPPFSWGGRVVGKRHLKAHSKANYGAHGDEYDAFVNIFEGGSLLYCNMSFEALLNVRKQLEELGFPCKAVNDGLWLQMLLSQRVQEIAADTCKSCCLMSMACTCRQPFAFSHGVTTAGYYIQEHNQSNMPGNVGNIYVAESSQGEGNSAFRPVRVHVRGTIDGLAGIGRGTTFVPAATSPPTRFVFSRVPFGVGNRNYAQSAANDDSELRADHNGDLSGDGLTALVGLSQGGSNVMNVHGELTQRGYEMDMQSRTTSGTTAGGQSTGGIPMQMLETPEHTIGLEWENPSSSSISLDLKTPLSHFPPFRFGVQFEDVHRLGDGQVKHSPEVFYAGSLWKVSVQAFNDEDPQGRRTLGLFLHRRKAEITDSHRKVHMYVDTREKVTARYQLICPSKREVMVFGSFKQTGTLLPKAPKGWGWRTALLFDELADLLQNGALRIIAVVQLV 877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01509 877 SMART BTB_4 61 161 IPR000210 GO:0005515
Bva10g01509 877 SUPERFAMILY POZ domain 55 159 IPR011333 -
Bva10g01509 877 ProSiteProfiles BTB domain profile. 61 131 IPR000210 GO:0005515
Bva10g01509 877 MobiDBLite consensus disorder prediction 1 31 - -
Bva10g01509 877 Pfam BTB/POZ domain 55 159 IPR000210 GO:0005515
Bva10g01509 877 Gene3D Potassium Channel Kv1.1; Chain A 28 194 IPR011333 -
Bva10g01509 877 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN 12 877 - -
Bva10g01509 877 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN 12 877 - -
Bva10g01509 877 MobiDBLite consensus disorder prediction 244 270 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Bva10g01509 BTB 7e-14 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01509 - - adu:107483601 1426.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g01509 10 10289294 10295629 Bva10g01509 10 10289294 10295629 ECH