Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01479 ATGACCAAGGTTTTAAACAGCTCTATGGAGCTCAGCAACAATGCCTTGGACATGGTTGCTGGGTTCTCTGATTTCCTTAAAGACATCAAGCTTGGTTTCGGCAATAGAAAGCTAATGTCGGCTTCAGAGGAAGCAACAATGGATGATGGTTTCCCTTCATGGCGGCACCATCGACTTGTGTTCGGCGACGCCGCCGTGATTTTCCAGAGATGCGATCTCATCGTGAGGAAACCACTGGACAACCAGAACTGCATCGTGGCAGCCGGGGGAAGGATGAAGCCATTAGACCCTAATGGACTCCAGATGTGTCACTTCACTGCAGAGGCAGATTACTTGACCTGGAGGGCAACCAGTGGCAGAACCTCGTATTTGGCAAGACCATGGAAGCCGTACGCCAAGACTGTGATCATTGATTCAACGATCGATGGGATTTTAAATCCAAAGGATTATATTGATTTGCAAGGCGCAGCTTATCATCAGACTTGCACTGCTTTAGAGTTTAACAACCAAGGACCTGGTGGTGATACTAGCCAGAGAGTGAAGTGGCCAGGTGTGAAGGTTTTGTCTAACACCGAAGTTGCCAGCTACTATCCGCTCAATTTCTATGAGATGAAAGACACTGACAAGGATTCCTTCATTTATGCCCCTAGGGTACCTTACAATCCCATTTA 671 0.4739 MTKVLNSSMELSNNALDMVAGFSDFLKDIKLGFGNRKLMSASEEATMDDGFPSWRHHRLVFGDAAVIFQRCDLIVRKPLDNQNCIVAAGGRMKPLDPNGLQMCHFTAEADYLTWRATSGRTSYLARPWKPYAKTVIIDSTIDGILNPKDYIDLQGAAYHQTCTALEFNNQGPGGDTSQRVKWPGVKVLSNTEVASYYPLNFYEMKDTDKDSFIYAPRVPYNPI 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01479 223 Pfam Pectinesterase 60 200 IPR000070 GO:0030599|GO:0042545
Bva10g01479 223 PANTHER PECTINESTERASE 59 220 - -
Bva10g01479 223 PANTHER PECTINESTERASE 1 39 - -
Bva10g01479 223 PANTHER PECTINESTERASE 59 220 - -
Bva10g01479 223 PANTHER PECTINESTERASE 1 39 - -
Bva10g01479 223 SUPERFAMILY Pectin lyase-like 59 202 IPR011050 -
Bva10g01479 223 Gene3D - 57 218 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01479 Bva-Chr10 10156661 10157800 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01479 59 220 Carbohydrate Esterase AT5G49180 35.976 1.13e-32 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01479 K01051 - gmx:100784682 166.392