Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01475 ATGCAAGATCGAAAGAAGAGGTACGCCATTCTTGGCCTCTCTTCCTTCCTTCTTGAAGCAATGGTGGCTATTCTTGCCATTACTGTAAACAACAAAGACGTAGGCAGCAGCCAGATCTTTAGCTCTCACAAGAACGTTGAGATGCTTTGCCAACCAGCAACTTACAAAGAAACCTGCAAGAATACCCTTGCCAAGGCCTCTAACGAATCCTCAGACCCCAAAGAGCTCGTAAAAATCGGTCTCAACGTGACCGTGGATGAGCTCAAGAAGATCATAAACAACTCTACTCTCTATAAAGAACTTGCCGAGGACAACATGACAAGAGAAGCTGTGGATATCTGCAAGGAAGTCATGGAGTTTGCCATTGACAACTTTTACCAATCTATTGACAAGTTGTCTTCTTTTGATTTGAGCAAGCTTGGCGTGAATGGTGCTTTCTTCACTGCCAAGAACGTTGGGTTTGAGAACGCAGCAGGGCCTGCGAAGCTCCAAGCAGTTGCACTCCATGGTCTTGGTGCTGACACGTCCAAGAGAGTTGCATGGCCTGGTGTCAAAGTGCTGACTGCAGTTGAGGCTAGTGATTTTTATCCTCAGAAGTTCTATGACCATAAGGATGTAGCTCTTAAGGATTCATGGATCCTTGCCTCTGGAGTCCCCTACTCTCCTGGCCAAAATGGCTCAAGTTACAACAACATGCACCTTGATTG 707 0.4611 MQDRKKRYAILGLSSFLLEAMVAILAITVNNKDVGSSQIFSSHKNVEMLCQPATYKETCKNTLAKASNESSDPKELVKIGLNVTVDELKKIINNSTLYKELAEDNMTREAVDICKEVMEFAIDNFYQSIDKLSSFDLSKLGVNGAFFTAKNVGFENAAGPAKLQAVALHGLGADTSKRVAWPGVKVLTAVEASDFYPQKFYDHKDVALKDSWILASGVPYSPGQNGSSYNNMHLD 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01475 235 CDD PMEI-like_3 49 140 - -
Bva10g01475 235 Gene3D Invertase/pectin methylesterase inhibitor family protein 41 151 IPR035513 -
Bva10g01475 235 PANTHER PECTINESTERASE 138 168 - -
Bva10g01475 235 PANTHER PECTINESTERASE 3 140 - -
Bva10g01475 235 TIGRFAM PME_inhib: pectinesterase inhibitor domain 26 139 IPR006501 GO:0004857
Bva10g01475 235 Pfam Plant invertase/pectin methylesterase inhibitor 46 136 IPR006501 GO:0004857
Bva10g01475 235 PANTHER PECTINESTERASE 138 168 - -
Bva10g01475 235 PANTHER PECTINESTERASE 3 140 - -
Bva10g01475 235 SMART PMEI_2 41 168 IPR006501 GO:0004857
Bva10g01475 235 PANTHER PECTINESTERASE 169 227 - -
Bva10g01475 235 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 44 140 IPR035513 -
Bva10g01475 235 PANTHER PECTINESTERASE 169 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01475 Bva-Chr10 10142669 10145471 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01475 4 140 Carbohydrate Esterase AT3G05610 37.324 2.98e-24 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01475 K01051 - gmx:100784682 137.117