Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01472 ATGGGGGCATACGAACAAAATGAGACGAAGAACAAGTTCGCCATTCTCGGCATCTCCTCCATCCTCCTGGTGACTATGTTTGCCGCCGTGGCCCACggcgaagaagaagaacacgGCATGTTCGAGGAAATGGGCCAGATTGCTTCATCTCAAAAGTTTACCAACGTAGACATGGTTTGCCGGTCAACGGAATACCAAAACACATGCAAGGAAAGCCTTGCAAATGCCGGAAACGGAAGCACGGACATAAAGGACTTGTTCAAAGCAGGGCTCAACGCCGCCATCGAGGAGATGAAGAAGCAGATCCACAACTCCACCCTTTTCAAAGAGCTTTCCACCGACGACAGCACCAAACAGGCCTTGGATGTGTGCAAGGAAGTGCTGGGTTTCGCCGTTGACAGTCTCCACGCATCAATACACAAGTTGGACAGGTTTGATATCCACAAGCTGCAAGATTACGCCTACGATCTCAAGATTTGGCTCAGTGCAACACTGACCCACCAGCAGACATGTTTGGACGCGTTTGAGGACACAACCACCAATGCAGGGAAGGAGATGACCAGGGTTTTAAACAGCTCCATGGAGCTCAGCAGCAATGCCTTGGACATGGTTACTGGGTTCTCTGATTTGCTTAAAAACTTTAAGTTTGGTTCAGGCAAAAGAAAGCTAATGTCGGCTTCAGAGGAAGCAACGATGGATGATGGTTTCCATTCATGGGTCAGTGAAGGGCATAGACGGCTCCTTCAGGTTGCTCCAGAAGGGGTTAAACCTAATGCGGTTGTGGCTCAAGATGGAAGTGGGGACTACAAAACCCTAACTGATGCCCTAAAATCTATTCCCAAGAAAAATAGAACCCCATTTGTGATCTACGTGAAAGCTGGCATATACAAGGAGTACGTGGACGTAAAGAAGCACATGACGCACGTGACCATCATCGGAGACGGTCCCACCCAGACCCGGTTCACCGGAAACAAGAACTATCTAGATGGTGTCAAGACTTACTTCACTGCAACATTTGGAGTCAACGCCGTTTACTTCACCGCCAAGAATGTCGGGTTCGAGAACACCGCAGGATCGTTGAAACACCAAGCCGTGGCACTCCGTGTAACCGCAGACAAGGCCGTGTTCTACAACTGCTTCATTGACGGTTACCAAGACAGCCTCTACGTTCAATCCCAGAGGCAATTCTACCGTGACTGCTCCATCAGCGGCACCATCGACTTCGTGTTCGGCGATGCCGCCGTGGTTTTCCAGAACTGCAAGCTCATCGTGAGGAAACCACTGGACAACCAGAACTGCATCGTCGCAGCCGGAGGAAGGATGAAGCCTGACGACCCTAATGGACTTATTTTCCAGAGCTGCCACTTCACTGCAGAGCCAGATTACTTGCCTTGGAAGGCAACCAGTGGCAGAACCTCGTATTTGGCAAGACCATGGAAGCCGTACGCCAAGACTGTGATCGTTGATTCAACGATCGATGGGATTTTTGATCCAAAGGGTTATCTTGATTGGGAGGGCACGGTTCATCATCAGACTTGCAGTGCTTTTGAGTTTAACAACAAAGGACCTGGTGCTGATACCAGCCAGAGGGTGAAGTGGCCAGGTGTGAAGGTATTGTCTGGACCCGAAGCTGCCACCTACTATCCGTACAAGTTCTATGAGATTAAGACTGCTACTGAAAAGGATAGCTTCATTTCTACCACTGGAATACCTTACAATGCTGCCAACATATA 1733 0.4893 MGAYEQNETKNKFAILGISSILLVTMFAAVAHGEEEEHGMFEEMGQIASSQKFTNVDMVCRSTEYQNTCKESLANAGNGSTDIKDLFKAGLNAAIEEMKKQIHNSTLFKELSTDDSTKQALDVCKEVLGFAVDSLHASIHKLDRFDIHKLQDYAYDLKIWLSATLTHQQTCLDAFEDTTTNAGKEMTRVLNSSMELSSNALDMVTGFSDLLKNFKFGSGKRKLMSASEEATMDDGFHSWVSEGHRRLLQVAPEGVKPNAVVAQDGSGDYKTLTDALKSIPKKNRTPFVIYVKAGIYKEYVDVKKHMTHVTIIGDGPTQTRFTGNKNYLDGVKTYFTATFGVNAVYFTAKNVGFENTAGSLKHQAVALRVTADKAVFYNCFIDGYQDSLYVQSQRQFYRDCSISGTIDFVFGDAAVVFQNCKLIVRKPLDNQNCIVAAGGRMKPDDPNGLIFQSCHFTAEPDYLPWKATSGRTSYLARPWKPYAKTVIVDSTIDGIFDPKGYLDWEGTVHHQTCSAFEFNNKGPGADTSQRVKWPGVKVLSGPEAATYYPYKFYEIKTATEKDSFISTTGIPYNAANI 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01472 577 SUPERFAMILY Pectin lyase-like 255 550 IPR011050 -
Bva10g01472 577 ProSitePatterns Pectinesterase signature 2. 402 411 IPR033131 -
Bva10g01472 577 Gene3D - 253 575 IPR012334 -
Bva10g01472 577 PANTHER PECTINESTERASE 7 573 - -
Bva10g01472 577 PANTHER PECTINESTERASE 7 573 - -
Bva10g01472 577 TIGRFAM PME_inhib: pectinesterase inhibitor domain 55 203 IPR006501 GO:0004857
Bva10g01472 577 SMART PMEI_2 49 203 IPR006501 GO:0004857
Bva10g01472 577 CDD PMEI-like_3 59 208 - -
Bva10g01472 577 Pfam Pectinesterase 258 552 IPR000070 GO:0030599|GO:0042545
Bva10g01472 577 Pfam Plant invertase/pectin methylesterase inhibitor 56 203 IPR006501 GO:0004857
Bva10g01472 577 Gene3D Invertase/pectin methylesterase inhibitor family protein 53 207 IPR035513 -
Bva10g01472 577 ProSitePatterns Pectinesterase signature 1. 283 302 IPR018040 -
Bva10g01472 577 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 56 207 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01472 Bva-Chr10 10127042 10136889 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01472 10 552 Carbohydrate Esterase AT5G49180 46.112 1.82e-179 517
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01472 K01051 - gmx:100820068 676.011