Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01471 ATGGCGGAGCCATCATATTTGGCCTCCTTCGAGCAACTCAACGTGAGATCATATCTGGAAAGGCCACGGAGGCCATATAAAAAGACTTTGCTCATGGATTCTCAGATTGACGCCATTTTTGACCCTCAAGGTTTTCTTCCATGGAATGGGGCTATTAACCATCAGAGTTGCTACTATTTTGAGTACAACAAGAAGGGTCTTGGTGCTGACACGGCCAAGAGAGTTGCATGGCCTGGTGTCAAAGTGCTGACTGCAGTTGAGGCTAGCGATTTTATCCTCAGAAGTTCTATGACCTTAAGGATGTA 305 0.459 MAEPSYLASFEQLNVRSYLERPRRPYKKTLLMDSQIDAIFDPQGFLPWNGAINHQSCYYFEYNKKGLGADTAKRVAWPGVKVLTAVEASDFILRSSMTLRM 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01471 101 PANTHER PECTINESTERASE 13 91 - -
Bva10g01471 101 Pfam Pectinesterase 12 92 IPR000070 GO:0030599|GO:0042545
Bva10g01471 101 PANTHER PECTINESTERASE 13 91 - -
Bva10g01471 101 SUPERFAMILY Pectin lyase-like 14 95 IPR011050 -
Bva10g01471 101 Gene3D - 5 100 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01471 Bva-Chr10 10119887 10125865 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01471 2 91 Carbohydrate Esterase AT5G49180 40.000 3.16e-19 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01471 K01051 - gmx:100784682 98.2117