Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01468 ATGTGGAAGGTGCTTTGGAAGATAAAGGCTCCAAGCAAATTGAAAATCTTCTTGTGGAGAGCATTGCATGAAGCTCTTCCAACAAAAGAGGTAGTGTTCAAAAgatcaaattatgttttagTGGAGTGCCCATCTTGCCCAAGCTGTCCGGAATCAATCATGCATGTATTAGTCCTGTATCCACTAGCTAAGGAAGTACGGTTTAGCTCTAAATTCAGTTTGACAGTACATAGGGTCAGAGCTAATTCCTTTGTGGAATGGTGGTGTGGCAGACAAGGTATCAACTCAGAGTGCAATAGCTTTCCAGAGCCGCCAGTTCATGGCGGAGCCATCATATTTGGCCTCCTTCGAGCAACTCAACGTGAGATCATATCTGGAAGGCCATGGAGGCCATATGCAAAGACTGTGTTCATTGATTCTCAGATTGACGCCATTTTTGACCCTCAAGGTTTTCTTCCATGGAATGGGGCTAATAACCATCAGAGTTGCTACTATTTTGAGCACAATAACAAGGGTCTTGGTGCTGACACGGCCAAGGGAGTTGCATGGCCTGGTGTCAAAGTGCTGACTGCAGTTGAGGCTAGCGATTTTTATCCTCAGAAGTTCTATGACCTTAAGGATGTAGCTCTTAAGGATTCCTGGATCCTTGCCTCTGGAGTCCCCTACTCTCCCATCCAAATGGCATA 686 0.4461 MWKVLWKIKAPSKLKIFLWRALHEALPTKEVVFKRSNYVLVECPSCPSCPESIMHVLVLYPLAKEVRFSSKFSLTVHRVRANSFVEWWCGRQGINSECNSFPEPPVHGGAIIFGLLRATQREIISGRPWRPYAKTVFIDSQIDAIFDPQGFLPWNGANNHQSCYYFEHNNKGLGADTAKGVAWPGVKVLTAVEASDFYPQKFYDLKDVALKDSWILASGVPYSPIQMA 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01468 228 PANTHER PECTINESTERASE 121 223 - -
Bva10g01468 228 Gene3D - 114 226 IPR012334 -
Bva10g01468 228 SUPERFAMILY Pectin lyase-like 122 204 IPR011050 -
Bva10g01468 228 Pfam zinc-binding in reverse transcriptase 2 65 IPR026960 -
Bva10g01468 228 Pfam Pectinesterase 125 203 IPR000070 GO:0030599|GO:0042545
Bva10g01468 228 PANTHER PECTINESTERASE 121 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01468 Bva-Chr10 10108531 10110215 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01468 126 222 Carbohydrate Esterase AT4G02330 41.237 1.41e-20 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01468 K01051 - gmx:100784682 128.257