Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01461 ATGAATTCGAATTATGGCAAATCTAACCAGCAGAAAGGTTCATCCGTTTCACTAAACAACTacagttttgattttgatctaGGGATCGGATCAAACCGatccaaatctctcaaagatcAGAAGAATCAGAATGCGTCGTActcatattcttcttcttcattctcGTCTACGCAATCGAAACCCTCATGGCAACCCAACAAGCCATCGTGGTCTCACCAGCCGGCGCCGACTGAGCCCGGATTGGCGACCGGACCCACTTCAATGGTTGGCGATATCTTTGGCAAGAGCTGGGGATCGGCTCAACCAACGGGTTCGAGTTCGAATTCCACTATCGGGATTGTTAATAAGAACCCCAATCTTTTTGGAGATTTGGTGAGCTCTGCTTTGGGGCAGGGTTCTAAGGGCGGAAGTAATGTTCCTCTGAAAAATGCAACACCTGCTTCCAAGGTATCGAGTGCCACAACCAACAAGAGTTCATTTTCCATGGGAAATATGGCAGATTCTTTGCCCAAAGCTAGTAATACGGCTCAAAGTAGTGGAAATTGGGGATCTTCTGGGAATTTTGCGAGTTACACTAGCGGGAACAACAATACCCGTATGAATGCTAGTAAAAGCCCCAATCTTGGGGGTCCTTCAATGCGAAGTATGGGTAGTGGTGGTCCAGCTGGAAGTGGAATAGGTTCTAACAAAGATCCATTTAGTTCATTGTCTGGTTTTGGATCAAAACCATCTGTTAGTCTCAATTCAGCTGCTAAAAGCGGACAGAGTGGTCCAGATGATGATGGTTTTGGAGATTTTCAGAATGCCTCCAAACCCAACTCTACCACATTCCCATCTAGTACTTCCTCAGCAAGTAATTTCGGTTCTAGCACAGGCATTGATGCAAATATTGGAGATTTTGGGTTCTCCTCTCAGAAGTCTGCCACTTCAAATCCGAACCCTGCCCATACCTCACGTGGTGATCCAATGGACATGTTTTTCTCATCTTCTTCAGCCTCAGCTGGAAGTACTTCTGTGGGCTCTGAAGGATTGGGAGGACAACCATCTTCTGGAATTGATGATTGGGGGTTAGATTCTGAGTTTGGTGGTGGAGGTCATGATGTGGGTGGTACAACCACTGAGCTTGAAGGTCTTCCACCTCCTCCTGCTGGTGTCTCAGGTTCCACGGCAAAGAGCAAGGGGATGGAAAATTACAAGCAGGGGCAGTTTGCAGATGCTATTAAGTGGCTATCTTGGGCTGTCATCCTTCTTGAGAAAGCAGGTGATACTGAAGGCACAGTGGAGGTTTTGTCATGCAGGGCTTCTTGTTACAAAGAAGTCGGGGAGTATAAAAAAGCGGTGGCTGATTGTACACAGGTGCTTGCGAGCGATGATGCAAACGTATCTGTCCTTGTACAACGTGCCCACTTGTATGAGAGTATGGAAAAGTACAGACTCGGTGCTGAAGATCTGAGGACTGTGCTGAAGATTGATCCTGGTAATAGGATTGCACGAAGTACCATCCACAGGTTGAATAAGCTCGCAGATTA 1529 0.4506 MNSNYGKSNQQKGSSVSLNNYSFDFDLGIGSNRSKSLKDQKNQNASYSYSSSSFSSTQSKPSWQPNKPSWSHQPAPTEPGLATGPTSMVGDIFGKSWGSAQPTGSSSNSTIGIVNKNPNLFGDLVSSALGQGSKGGSNVPLKNATPASKVSSATTNKSSFSMGNMADSLPKASNTAQSSGNWGSSGNFASYTSGNNNTRMNASKSPNLGGPSMRSMGSGGPAGSGIGSNKDPFSSLSGFGSKPSVSLNSAAKSGQSGPDDDGFGDFQNASKPNSTTFPSSTSSASNFGSSTGIDANIGDFGFSSQKSATSNPNPAHTSRGDPMDMFFSSSSASAGSTSVGSEGLGGQPSSGIDDWGLDSEFGGGGHDVGGTTTELEGLPPPPAGVSGSTAKSKGMENYKQGQFADAIKWLSWAVILLEKAGDTEGTVEVLSCRASCYKEVGEYKKAVADCTQVLASDDANVSVLVQRAHLYESMEKYRLGAEDLRTVLKIDPGNRIARSTIHRLNKLAD 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01461 509 MobiDBLite consensus disorder prediction 32 111 - -
Bva10g01461 509 MobiDBLite consensus disorder prediction 267 288 - -
Bva10g01461 509 Gene3D Tetratricopeptide repeat domain 386 509 IPR011990 GO:0005515
Bva10g01461 509 MobiDBLite consensus disorder prediction 132 288 - -
Bva10g01461 509 MobiDBLite consensus disorder prediction 132 212 - -
Bva10g01461 509 MobiDBLite consensus disorder prediction 302 393 - -
Bva10g01461 509 MobiDBLite consensus disorder prediction 302 345 - -
Bva10g01461 509 SMART tpr_5 387 420 IPR019734 GO:0005515
Bva10g01461 509 SMART tpr_5 427 460 IPR019734 GO:0005515
Bva10g01461 509 SMART tpr_5 461 494 IPR019734 GO:0005515
Bva10g01461 509 SUPERFAMILY TPR-like 391 501 IPR011990 GO:0005515
Bva10g01461 509 PANTHER OS03G0340700 PROTEIN 1 509 - -
Bva10g01461 509 MobiDBLite consensus disorder prediction 228 255 - -
Bva10g01461 509 MobiDBLite consensus disorder prediction 32 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01461 Bva-Chr10 10063052 10065580 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01461 386 506 Calmodulin-binding Proteins AT3G25230 27.692 1.13e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01461 - - vun:114178472 556.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g01461 10 10063052 10065580 Bva10g01461 10 10063052 10065580 ECH