Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01460 ATGTGTGGGGGTGCTCTCATTTCCGACTACGTCGCCGACGACAAGAATTGCCGCCGATTGACTACCGATGACCTCTGGTCCCTCGTTGATCCCTCCCCTGAAAATGTTGGCTTCCACCCCAAACGCCAATCCCAATTCCCAGTCAACAGAGgaGTGGCACTGGCATGTGACAGCAGCATCGACAAGGAGAAGAAAACTGTGGCTGCAAAAGGGGTAGTGAAGGGTACTCAGACGCAGCGGGTTCGCAAGAACATGTATCGAGGAATCAGGCAAAGACCTTGGGGCAAATGGGCTGCTGAAATAAGGGACCCACAAAAGGGTACCCGAGTCTGGCTTGGTACCTTCAATACCGACGTTGAAGCAGCCAGAGCTTACGACGAAGCCGCCAAGCGCATCCGCGGTGAAAAGGCCAAGCTGAACTTCCCCGAGAAGCCTGTGGCGCCAAAGGCTCTGTCTCTGGCTCCGGCTCGAGCTCCAGCTGGGGCTTTCCAGCCACCCTCCAAGAAGCTGTGCCTGAGCCCTGAGATGGATTTGAAGGAGACGATCTCAAGCCTGGAATCATTCCTGGGTCTGGAGCATGAGGAGCCAACGCAGCAGCCGAGTGCAAATGTCGATTTGTGGGGCTCCACCGAGACCGAGGTGTGGAACCTGGATGACTTGGTTAACCATCACATGCTTTACTA 683 0.5534 MCGGALISDYVADDKNCRRLTTDDLWSLVDPSPENVGFHPKRQSQFPVNRGVALACDSSIDKEKKTVAAKGVVKGTQTQRVRKNMYRGIRQRPWGKWAAEIRDPQKGTRVWLGTFNTDVEAARAYDEAAKRIRGEKAKLNFPEKPVAPKALSLAPARAPAGAFQPPSKKLCLSPEMDLKETISSLESFLGLEHEEPTQQPSANVDLWGSTETEVWNLDDLVNHHMLY 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01460 227 Gene3D AP2/ERF domain 85 144 IPR036955 GO:0003700|GO:0006355
Bva10g01460 227 CDD AP2 86 143 IPR001471 GO:0003700|GO:0006355
Bva10g01460 227 ProSiteProfiles AP2/ERF domain profile. 85 142 IPR001471 GO:0003700|GO:0006355
Bva10g01460 227 PANTHER DNA-BINDING DOMAIN 1 160 IPR044808 GO:0003700|GO:0009873
Bva10g01460 227 SMART rav1_2 85 148 IPR001471 GO:0003700|GO:0006355
Bva10g01460 227 PANTHER EREBP TRANSCRIPTION FACTOR 1 160 - -
Bva10g01460 227 Pfam AP2 domain 86 135 IPR001471 GO:0003700|GO:0006355
Bva10g01460 227 PRINTS Ethylene responsive element binding protein signature 86 97 IPR001471 GO:0003700|GO:0006355
Bva10g01460 227 PRINTS Ethylene responsive element binding protein signature 124 144 IPR001471 GO:0003700|GO:0006355
Bva10g01460 227 SUPERFAMILY DNA-binding domain 85 143 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01460 Bva-Chr10 10058006 10059068 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01460 1 224 AP2-EREBP Transcription Factor Family AT3G16770 40.530 5.76e-49 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bva10g01460 AP2 3.2e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01460 K09286 - tcc:18603555 187.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g01460 10 10058006 10059068 Bva10g01460 10 10058006 10059068 ECH